Table 3. Pair-wise correlations.
Pearson correlation analysis | ||||||||||||
miRNA | qPCR vs Agilent | qPCR vs Exiqon | qPCR vs Illumina | qPCR vs Miltenyi | Agilent vs Exiqon | Agilent vs Illumina | Agilent vs Miltenyi | Exiqon vs Illumina | Exiqon vs Miltenyi | Illumina vs Milteny | ||
Differentially expressed in at least 3/4 platforms | hsa-miR-378 | 0.67 | 0.87 | 0.83 | 0.54 | 0.64 | 0.63 | 0.75 | 0.9 | 0.59 | 0.68 | |
hsa-miR-375 | 0.91 | 0.7 | 0.86 | 0.49 | 0.67 | 0.85 | 0.32 | 0.63 | 0.86 | 0.52 | ||
hsa-miR-21* | 0.44 | 0.42 | 0.39 | 0.27 | 0.1 | 0.16 | 0.39 | 0.52 | 0.64 | 0.57 | ||
hsa-miR-145 | 0.94 | 0.81 | 0.96 | 0.83 | 0.78 | 0.92 | 0.81 | 0.81 | 0.96 | 0.84 | ||
hsa-miR-96 | 0.53 | 0.48 | 0.67 | – | 0.74 | 0.69 | – | 0.6 | – | – | ||
hsa-miR-21 | 0.76 | 0.77 | −0.05 | 0.72 | 0.93 | 0.00 | 0.87 | −0.23 | 0.87 | 0.02 | ||
hsa-miR-147b | 0.67 | 0.55 | 0.72 | – | 0.47 | 0.76 | – | 0.61 | – | – | ||
hsa-miR-143 | 0.66 | 0.68 | 0.86 | 0.59 | 0.91 | 0.6 | 0.88 | 0.64 | 0.88 | 0.57 | ||
Differentially expressed in at least 2/4 platforms | Concordant | hsa-miR-93 | 0.33 | −0.25 | −0.19 | −0.14 | 0.07 | 0.5 | −0.07 | 0.4 | 0.61 | 0.44 |
hsa-miR-886-5p | 0.15 | – | 0.76 | 0.26 | – | 0.25 | 0.27 | – | – | 0.21 | ||
hsa-miR-886-3p | 0.41 | – | 0.48 | 0.00 | – | 0.69 | 0.71 | – | – | 0.4 | ||
hsa-miR-497 | 0.79 | – | 0.79 | 0.52 | – | 0.84 | 0.65 | – | – | 0.63 | ||
hsa-miR-30a | 0.7 | −0.01 | 0.65 | – | −0.47 | 0.46 | – | −0.2 | – | – | ||
hsa-miR-182 | 0.48 | 0.17 | 0.86 | – | 0.55 | 0.58 | – | 0.04 | – | – | ||
hsa-miR-139-5p | 0.83 | 0.76 | 0.87 | 0.27 | 0.63 | 0.79 | 0.22 | 0.74 | 0.91 | 0.48 | ||
hsa-miR-136 | 0.69 | 0.29 | 0.72 | – | 0.25 | 0.56 | – | 0.31 | – | – | ||
Discordant | hsa-miR-218 | 0.5 | −0.41 | 0.77 | – | 0.06 | 0.55 | – | −0.32 | – | – | |
hsa-miR-302a | 0.24 | −0.01 | 0.06 | – | −0.2 | −0.04 | – | −0.52 | – | – |