Skip to main content
. 2012 Aug 28;13:428. doi: 10.1186/1471-2164-13-428

Table 1.

QTL from Conrad againstPhytophthora sojaemapped using the F6:8Conrad × Sloan population

QTLa
 IM
 CIM
 Markerb
 Selected lines for qRT-PCRc
  LOD Exp. Var. (%) LOD Exp. Var. (%)   R 2022 1960 1974 1854 S
19-1
 6.0
 11.8
 3.5
 4.8
 BARC-047496-12943
 +
 +
 +
 -
 -
 -
 
  
  
  
  
 Satt527
 +
 +
 +
 -
 -
 -
 
  
  
  
  
 Glyma19g35340
 +
 +
 +
 -
 -
 -
 
  
  
  
  
 GML_OSU10d
 +
 +
 +
 -
 -
 -
 
  
  
  
  
 BARCSOYSSR_19_1243
 +
 +
 +
 -
 -
 -
19-2
 9.4
 18.1
 7.9
 11.9
 Glyma19g40800
 +
 +
 +
 -
 -
 -
 
  
  
  
  
 BARCSOYSSR_19_1452d
 +
 +
 +
 -
 -
 -
 
  
  
  
  
 Glyma19g40940
 +
 +
 +
 -
 -
 -
 
  
  
  
  
 Glyma19g41210
 +
 +
 +
 -
 -
 -
 
  
  
  
  
 Glyma19g41390
 +
 +
 +
 -
 -
 -
 
  
  
  
  
 BARCSOYSSR_19_1473
 +
 +
 +
 -
 -
 -
 
  
  
  
  
 Glyma19g41580
 +
 +
 +
 -
 -
 -
 
  
  
  
  
 Glyma19g41780
 +
 +
 +
 -
 -
 -
 
  
  
  
  
 Glyma19g41800
 +
 +
 +
 -
 -
 -
 
  
  
  
  
 Glyma19g41870
 +
 +
 +
 -
 -
 -
 
  
  
  
  
 Glyma19g41900
 +
 +
 +
 -
 -
 -
 
  
  
  
  
 Glyma19g42120
 +
 +
 +
 -
 -
 -
 
  
  
  
  
 Glyma19g42200
 +
 +
 +
 -
 -
 -
 
  
  
  
  
 Glyma19g42220
 +
 +
 +
 -
 -
 -
 
  
  
  
  
 Glyma19g42240
 +
 +
 +
 -
 -
 -
 
  
  
  
  
 Glyma19g42340
 +
 +
 +
 -
 -
 -
 
  
  
  
  
 Glyma19g42390
 +
 +
 +
 -
 -
 -
 
  
  
  
  
 BARC-039977-07624
 +
 +
 +
 -
 -
 -
1
 3.1
 6.0
 3.7
 5.0
 BARC-060037-16311
 +
 +
 -
 +
 -
 -
 
  
  
  
  
 BARC-064441-18673d
 +
 +
 -
 +
 -
 -
 
  
  
  
  
 BARC-054071-12319
 +
 +
 -
 +
 -
 -
18-1
 5.3
 11.7
 4.5
 6.1
 BARCSOYSSR_18_1707d
 +
 -
 -
 +
 +
 -
 
  
  
  
  
 BARCSOYSSR_18_1710
 +
 -
 -
 +
 +
 -
18-2
 10.5
 19.6
 8.4
 9.3
 BARCSOYSSR_18_1777
 +
 -
 -
 +
 +
 -
 
  
  
  
  
 BARC-057845-14952
 +
 -
 -
 +
 +
 -
 
  
  
  
  
 BARC-039397-07314d
 +
 -
 -
 +
 +
 -
          BARCSOYSSR_18_1949 + - - + + -

The QTL presence in the six selected lines for qRT-PCR is also shown.

a QTL were presented as chromosome number, followed by the serial number if there were more than one on the same chromosome;

b Markers tested in each QTL interval: markers started with ‘BARC’ or ‘Sat’ are from the public databases (Choi et al., 2007; Hyten et al., 2010; Song et al., 2010), and markers started with ‘Glyma’ are the PAMSA markers designed in this study;

c Conrad (R) alleles for each marker were presented as “+” in the selected lines for qRT-PCR, while “-” referred to the Sloan (S) alleles;

d Nearest marker under each QTL interval.