TABLE 4.
TOP SINGLE-NUCLEOTIDE POLYMORPHISMS WITHIN SIGNATURE GENES ASSOCIATED WITH ELEVATED TRICUSPID REGURGITATION JET VELOCITY
SNP | Signature Gene | Ref Allele | P Value | P Value* | OR | Freq SCD High TRV Cases | Freq SCD Control | Freq ASW | Function |
rs799813 | GALNT13 | C | 0.001 | 0.002 | 0.28 | 0.094 | 0.27 | 0.25 | Intronic |
rs2794452 | PRELP | C | 0.001 | 0.013 | 0.42 | 0.34 | 0.55 | 0.58 | Upstream |
rs10497120 | GALNT13 | C | 0.001 | 0.001 | 2.76 | 0.33 | 0.15 | 0.13 | Upstream |
rs13407922 | GALNT13 | A | 0.002 | 0.003 | 3.08 | 0.24 | 0.095 | 0.14 | Intronic |
rs16833378 | GALNT13 | G | 0.003 | 0.003 | 0.26 | 0.061 | 0.20 | 0.11 | Upstream |
rs9808145 | GALNT13 | A | 0.004 | 0.006 | 2.97 | 0.22 | 0.089 | 0.13 | Intronic |
Definition of abbreviations: ASW = African ancestry from Southwest United States; Freq = frequency; OR = odds ratio; Ref = reference; SCD = sickle cell disease.
Adjusted for cohort.