Table 1.
(a) Biological processes and occurrence numbers of the same activated high expression (fold change ≥2) PTHLH feedback-mediated cell adhesion GO network in HCC compared with the corresponding low expression activated GO network of no-tumor hepatitis/cirrhotic tissues (HBV or HCV infection), (b) the different compared with the corresponding inhibited PTHLH feedback-mediated cell adhesion GO network of no-tumor hepatitis/cirrhotic tissues, and (c) the same compared with the corresponding inhibited GO network of HCC by our programming.
| (a) Biological process and occurrence number of GO term | |
|---|---|
| Anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolism | 5 |
| Cell adhesion | 8 |
| Cell differentiation | 2 |
| Cell-cell signaling | 5 |
| Endothelial cell migration | 2 |
| G-protein-coupled receptor protein signaling pathway | 4 |
| G-protein signaling | 2 |
| Intracellular transport | 2 |
| metabolism | 4 |
| Phosphoinositide-mediated signaling | 4 |
| Positive regulation of transcription | 3 |
| Protein amino acid phosphorylation | 8 |
| Regulation of cyclin-dependent protein kinase activity | 8 |
| Regulation of transcription | 8 |
| Signal transduction | 10 |
| Transcription | 8 |
| Transport | 2 |
|
| |
| (b) Biological process and occurrence number of GO term | |
|
| |
| Integrin-mediated signaling pathway | 2 |
| Intracellular transport | 2 |
| Microtubule cytoskeleton organization and biogenesis | 2 |
| Regulation of cell growth | 2 |
| Regulation of cyclin-dependent protein kinase activity | 8 |
|
| |
| (c) Biological process and occurrence number of GO term | |
|
| |
| Anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolism | 5 |
| Cell adhesion | 8 |
| Cell differentiation | 2 |
| Cell-cell signaling | 5 |
| DNA repair | 2 |
| G-protein-coupled receptor protein signaling pathway | 4 |
| Integrin-mediated signaling pathway | 2 |
| Metabolism | 4 |
| Nucleotide and nucleic acid metabolism | 2 |
| Oxidation reduction | 5 |
| Phosphoinositide-mediated signaling | 4 |
| Positive regulation of transcription | 3 |
| Protein modification | 2 |
| Proteolysis | 5 |
| Regulation of cyclin-dependent protein kinase activity | 8 |
| Regulation of transcription | 8 |
| Signal transduction | 10 |
| Transcription | 8 |
| Transport | 2 |