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. Author manuscript; available in PMC: 2012 Sep 18.
Published in final edited form as: J Chem Inf Model. 2011 Jul 1;51(7):1521–1527. doi: 10.1021/ci1004948

Table 3.

Compound library comparison performance using integer fingerprint algorithm on machine 3

Reference and Candidate Libraries Time (sec) Throughput (kTanimotos/sec) Effective Bandwidth (GB/sec)
A vs A 0.47 209507 26.43
A vs B 0.95 257483 32.68
A vs C 2.12 261684 33.18
B vs A 0.94 261884 33.03
B vs B 2.29 267136 33.90
B vs C 4.85 286175 36.26
C vs A 2.00 278064 35.17
C vs B 4.80 288914 36.63
C vs C 11.37 276519 35.03