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. Author manuscript; available in PMC: 2012 Sep 18.
Published in final edited form as: J Chem Inf Model. 2011 Jul 1;51(7):1521–1527. doi: 10.1021/ci1004948

Table 4.

Compound library comparison performance using sparse vector algorithm on machine 2

Reference and Candidate Libraries Time (sec) Throughput (kTanimotos/sec)
A vs A 22.11 4434
A vs B 52.92 4631
A vs C 122.75 4523
B vs A 53.33 4596
B vs B 126.63 4839
B vs C 295.00 4705
C vs A 122.14 4546
C vs B 291.38 4764
C vs C 674.17 4664