Table 1.

Codon values for the nPPR and PPR

Genotype	Parametera	Valueb
		nPPR			PPR
		1	2	3	1	2	3
Genotype 1	Conserved	0.90	0.93	0.38	0.63	0.52	0.34
	S	171	122	1010	26	34	47
	π	0.023	0.013	0.18	0.10	0.12	0.18
	Mean Hx	0.037	0.022	0.28	0.15	0.19	0.27
	μ	0.30	0.15	2.55	0.76	0.88	1.36
Genotype 3	Conserved	0.82	0.91	0.060	0.11	0.20	0.043
	S	409	270	1533	104	102	115
	π	0.048	0.014	0.38	0.29	0.27	0.42
	Mean Hx	0.077	0.027	0.61	0.50	0.45	0.71
	μ	0.25	0.048	2.70	0.82	0.64	1.54
Genotype 4	Conserved	0.81	0.90	0.058	0.18	0.16	0.00
	S	324	189	1532	70	73	85
	π	0.038	0.010	0.36	0.28	0.28	0.48
	Mean Hx	0.062	0.020	0.57	0.46	0.47	0.80
	μ	0.25	0.044	2.70	0.78	0.74	1.48
Avian	Conserved	0.90	0.97	0.31	0.53	0.60	0.13
	S	147	43	998	41	35	77
	π	0.053	0.016	0.38	0.26	0.23	0.52
	Mean Hx	0.062	0.018	0.46	0.32	0.28	0.63
Rubivirus	Conserved	0.92	0.96	0.40	0.61	0.62	0.25
	S	161	84	1197	44	43	84
	π	0.017	0.0060	0.14	0.10	0.078	0.18
	Mean Hx	0.027	0.011	0.22	0.17	0.14	0.31
	μ	0.28	0.10	2.62	0.70	0.77	1.53

^aConserved, fraction of conserved nucleotides; S, number of segregating sites; π, nucleotide diversity; Mean Hx, mean Shannon entropy; μ, relative mutation rate.

^bNumbers above columns represent codon positions.