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. 2012 Sep 19;7(9):e45013. doi: 10.1371/journal.pone.0045013

Table 5. Maximum diversity (species richness) estimators applied to the NE Madagascar surveys, based on random samples of 6, 7, 8, 10, 12, 15, 20, 25, 30 and 36 samples*.

Samp Sobs Chao Jacknife Boot- UGE MM Smax
les 1 2 1 2 strap
6 212 269.6 269.6 267.8 291.7 238.7 212 211.8 286.3
7 210 249.6 249.6 262.3 277.9 236.0 210 210.2 286.4
8 221 253.7 253.7 267.4 279.5 244.6 221 221.2 282.5
10 235 291.7 291.7 291.7 317.2 261.9 235 231.3 285.9
12 236 264.9 264.9 279.1 289.9 257.8 236 234.0 279.1
15 242 265.1 265.1 282.1 289.4 263.2 242 243.8 298.3
20 252 281.4 281.4 295.7 306.4 274.3 252 248.8 290.6
25 257 269.9 269.9 285.3 291.4 273.0 257 255.9 287.6
30 262 274.0 274.0 285.7 290.8 275.5 262 263.0 292.9
36 269 285.9 285.9 294.3 300.5 282.6 269 268.0 292.7
max 269.0 291.7 291.7 295.7 317.2 282.6 269.0 268.0 298.3
m 239.6 270.6 270.6 281.1 293.5 260.8 239.6 238.8 288.2
sd 20.7 13.3 13.3 11.8 11.8 16.3 20.7 20.5 5.6
CV 0.086 0.049 0.049 0.042 0.040 0.063 0.086 0.086 0.019
range 59.0 42.1 42.1 33.4 39.3 46.6 59.0 57.8 19.2

Sobs - Curve of observed species counts; Chao 1 - Chao's estimator based on number of rare species; Chao 2 - Chao's estimator using just presence-absence data; Jacknife 1 - Jacknife estimator based on species that only occur in one sample; Jacknife 2 - Second order jacknife estimator; Bootstrap - Bootstrap estimator based on proportion of quadrats containing each species; UGE - Calculated species accumulation curve; Michaelis-Menten - MM are points on the curve fitted to Sobs, with curve parameter Smax = asymptote at infinity [39], [88][92].

Notes:

*

The only condition for including a sample in these subsamples was that for cases of <15 samples, only full-diversity samples were selected by excluding minor samples in which <40 coral species were recorded overall (see methods for cases where sampling of species was constrained by other objectives during a dive, so records were taken only of new species seen in that dive).