Table 3.
Alignment of VP1 amino acid (200–225) sequences from different EV71 subgenotypes and CVA16.
| Strains | EV71 subgenotype or CVA16 |
Sequences |
|---|---|---|
| BrCr | A | QWFYDGYPTFGEHKQEKDLEYGAC |
| 238/TW66 | B1 | QWFYDGYPTFGEHKQEKDLEYGAC |
| 7423/CT/87 | B2 | QWFYDGYPTFGEHKQEKDLEYGAC |
| EV71/SAR/SHA66 | B3 | QWFYDGYPTFGEHKQEKDLEYGAC |
| EV71/9/97/SHA89 | B4 | QWFYDGYPTFGEHKQEKDLEYGAC |
| N2838-TW-03 | B5 | QWFYDGYPTFGEHKQEKDLEYGAC |
| 1M/AUS/12/00 | C1 | QWFYDGYPTFGEHKQEKDLEYGAC |
| TW/2086/98 | C2 | QWFYDGYPTFGEHKQEKDLEYGAC |
| Kor/EV71/10 | C3 | QWFYDGYPTFGEHKQEKDLEYGAC |
| N3340-TW-02 | C4 | QWFYDGYPTFGEHKQEKDLEYGAC |
| EV71 E59 | B4 | QWFYDGYPTFGEHKQEKDLEYGAC |
| Tainan/5079/98 | CVA16 | QWFYDGYPTFGEHLQANDLDYGQC |