Table 1.
Clinical Profile of the Study Subjects and the Sequence Details
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LTR (MFNLP) |
GenBank accession No. |
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| S. No. | Clinical code | Gender | Age (Years) | CD4 (cells/mm3) | F-κB | κB like | RBEIII | LTR | env |
| 1 | BL42/02 | M | 35 | 412 | + | − | − | HQ202921 | JQ250636 |
| 2 | D24a | M | 39 | — | + | − | − | EF1786131 | EF469243 |
| 3 | 02/529 | F | 31 | 573 | + | − | − | HQ202939 | JQ250624 |
| 4 | S38 | M | 41 | — | + | − | − | HQ202922 | JQ250642 |
| 5 | KR15 | F | 42 | 234 | + | − | − | HQ202924 | JQ250639 |
| 6 | 516 | M | 34 | 345 | + | − | − | JQ268626 | JQ250634 |
| 7 | A35/01 | F | 36 | 512 | + | − | − | JQ268631 | JQ250635 |
| 8 | 2/498 | M | 33 | 342 | + | − | − | JQ268636 | JQ250622 |
| 9 | 2/566 | M | 26 | 421 | + | − | − | JQ268639 | JQ250627 |
| 10 | 2/567 | F | 29 | 344 | + | − | − | JQ268643 | JQ250628 |
| 11 | 2/481 | M | 26 | 253 | + | − | − | JQ268650 | JQ250621 |
| 12 | 2/532 | F | 28 | 227 | + | − | − | HQ202946 | JQ250625 |
| 13 | HY6 | M | 35 | — | − | + | − | HQ202925 | JQ250638 |
| 14 | 2/502 | F | 30 | 787 | − | + | − | JQ268653 | JQ250623 |
| 15 | KR22 | M | 40 | 80 | − | + | − | HQ202936 | JQ250640 |
| 16 | KR6 | M | 38 | — | − | + | − | HQ202934 | JQ250641 |
| 17 | 02/6 | M | 23 | 218 | − | − | + | HQ202930 | JQ250630 |
| 18 | 2/570 | F | 32 | 323 | − | − | + | HQ202937 | JQ250629 |
| 19 | 02/9 | F | 29 | 566 | − | − | + | HQ202938 | JQ250632 |
| 20 | SEVA9 | M | 34 | — | − | − | + | HQ202933 | JQ250644 |
| 21 | S45 | F | 27 | — | − | − | + | EU74705 | JQ250643 |
| 22 | HY49 | M | 27 | — | − | − | + | HQ202935 | JQ250637 |
| 23 | 02/7 | F | 25 | 50 | − | + | + | HQ202931 | JQ250631 |
| 24 | 3/BL61 | M | 38 | — | − | + | + | HQ202923 | JQ250633 |
| 25 | 02/538 | F | 36 | 61 | − | + | + | HQ202932 | JQ250626 |
a
D24 is an infectious molecular clone of subtype C containing four NF-κB sites in the LTR and has been reported previously with the following GenBank accession No. EF469243. There is no separate GenBank entry for the env sequence of the D24 molecular clone, hence the accession number of the full length molecular clone was considered for the env sequence.
LTR, long terminal repeat; MFNLP, most frequent naturally occurring length polymorphism.