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. 2012 Oct;28(10):1357–1361. doi: 10.1089/aid.2011.0376

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Copyright 2012, Mary Ann Liebert, Inc.

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FIG. 2. — Recombinant analysis of the novel identified CRF52_01B. (A) Posterior probabilities of the subtypes at each sequence position (original sequence positions) calculated by jpHMM. Inset: The different symbols represent different reference strains. (B) Genome map (based on HXB2 numbering). Numbers in the figure above denote intervals for recombination breakpoints based on HXB2 numbering. The white regions denote missing information due to input fragment sequences. Subtype N/A denotes missing information due to uninformative subtype models (subtype: N/A).