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. 2012 Sep 21;3:342. doi: 10.3389/fmicb.2012.00342

Table 2.

Indicator species test.

Times of appearance in
OTUs Roots Rhizomes Leaves All Cluster Indicator value Probability
OTU_15 1 4 12 17 Leaves 0.1344 0.001
OTU_14 7 5 17 29 Leaves 0.1612 0.004
OTU_33 5 9 13 27 Leaves 0.0994 0.186
OTU_1 0 0 2 2 Leaves 0.0323 0.209
OTU_5 0 0 2 2 Leaves 0.0323 0.216
OTU_7 6 1 7 14 Leaves 0.0579 0.232
OTU_16 5 5 8 18 Leaves 0.0571 0.482
OTU_6 12 7 12 31 Leaves 0.0756 0.63
OTU_11 3 5 6 14 Leaves 0.0408 0.698
OTU_34 0 8 0 8 Rhizomes 0.1404 0.001
OTU_4 15 21 6 42 Rhizomes 0.197 0.005
OTU_19 0 4 0 4 Rhizomes 0.0702 0.011
OTU_10 5 13 6 24 Rhizomes 0.1302 0.019
OTU_12 10 26 25 61 Rhizomes 0.2063 0.019
OTU_31 0 2 0 2 Rhizomes 0.0351 0.074
OTU_23 1 3 0 4 Rhizomes 0.041 0.079
OTU_17 0 2 0 2 Rhizomes 0.0351 0.095
OTU_21 1 2 0 3 Rhizomes 0.0246 0.199
OTU_25 2 3 2 7 Rhizomes 0.0241 0.675
OTU_9 1 2 2 5 Rhizomes 0.015 0.875
OTU_26 39 13 21 73 Roots 0.2949 0.001
OTU_29 24 2 0 26 Roots 0.3263 0.001
OTU_30 13 2 0 15 Roots 0.1643 0.001
OTU_27 14 0 8 22 Roots 0.1292 0.004
OTU_2 14 1 5 20 Roots 0.1422 0.005
OTU_24 17 8 1 26 Roots 0.1569 0.006
OTU_8 7 2 2 11 Roots 0.0635 0.104
OTU_32 3 0 0 3 Roots 0.0448 0.136
OTU_18 11 3 7 21 Roots 0.0818 0.157
OTU_20 11 3 9 23 Roots 0.0745 0.288
OTU_22 5 0 4 9 Roots 0.04 0.289
OTU_13 18 12 11 41 Roots 0.1099 0.405
OTU_28 5 4 3 12 Roots 0.0288 0.921
OTU_3 1 0 0 1 Roots 0.0149 1

Number of times each OTU was found in each tissue class, and in total. Cluster indicates the group for which each OTU is a likely indicator, with the indicator value and the associated probability. Statistically significant indicator species shown in bold.