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. 2012 Sep 21;7(9):e45148. doi: 10.1371/journal.pone.0045148

Table 1. Evolutionary analysis of MGgLYZ1 and MGgLYZ2 genes.

Gene Model lnL Estimates of parameters 2Δl P value Positively selected sites
MGgLYZ1 M0 −1149 ω = 1.27997 2 P>0.05
M3 −1148 p0 = 0.54424, p1 = 0.44486, (p2 = 0.01090), ω0 = 1.14654, ω1 = 1.14655, (ω2 = 16.90789) All of the amino acids
M1a −1149 P0 = 0.00001, (p1 = 0.99999) 2 P>0.05 Not allowed
M2a −1148 p0 = 0.43345, p1 = 0.55448, (p2 = 0.01208), ω0 = 1.0000, (ω1 = 1), ω2 = 14.74815 116P, 203R
M7 −1149 p = 0.95401, q = 0.00500 2 P>0.05 Not allowed
M8 −1148 p0 = 0.98792, p = 0.20022, q = 0.00500, (p1 = 0.01208), ω = 14.74799 11L, 20N, 27V, 31K, 33M, 44H, 48D, 49Q, 54I, 63K, 67N, 82E, 84R, 86G, 87K, 91S, 99H, 106Q, 109V, 112D, 116P, 133N, 135M, 148K, 156D, 173N, 179K, 183G, 193V, 202H, 203R
MGgLYZ2 M0 −1319 ω = 0.55040 18 P<0.01
M3 −1310 p0 = 0.00037, p1 = 0.98079, (p2 = 0.01884), ω0 = 0.0000, ω1 = 0.42149, (ω2 = 13.32169) 5L, 102Y, 200L, 202S
M1a −1316 P0 = 0.55948, (p1 = 0.44052) 8 P<0.05 Not allowed
M2a −1312 p0 = 0.96687, p1 = 0.01620, (p2 = 0.01693), ω0 = 0.41968, (ω1 = 1), ω2 = 16.14571 5L, 102Y, 200L, 202S
M7 −1317 p = 0.06414, q = 0.07120 14 P<0.001 Not allowed
M8 −1310 p0 = 0.98176, p = 4.08597, q = 5.48325, (p1 = 0.01824), ω = 13.52309 5L, 102Y, 200L, 202S