Table 1. Effect of the CD4+ T cell global DNA methylation status and the expression of different DNA methylation-related enzymes (DNMT1, DNMT3A, DNMT3B, MBD2, and MBD4) on the expression of ITGAL, PRF1, KIR2DL4, CD70, and CD40LG.
ITGAL | PRF | KIR2DL4 | CD70 | CD40LG | ||||||
Controls | Patients | Controls | Patients | Controls | Patients | Controls | Patients | Controls | Patients | |
DNA dmC content | p = 0.028 r = 0.410 | p = 0.016 r = −0.443 | p = 0.308 r = 0.196 | p = 0.005 r = −0.505 | p = 0.610 r = 0.214 | p = 0.397 r = −0.429 | p = 0.754 r = 0.061 | p = 0.777 r = 0.055 | p = 0.172 r = 0.261 | p = 0.056 r = −0.359 |
DNMT1 | p = 0.022 r = 0.425 | p = 0.237 r = 0.227 | p = 0.743 r = −0.064 | p = 0.140 r = 0.281 | p = 0.243 r = 0.476 | p = 0.497 r = 0.371 | p = 0.392 r = 0.165 | p = 0.709 r = 0.072 | p = 0.218 r = 0.236 | p = 0.095 r = 0.316 |
DNMT3A | p = 3×10−7 r = 0.791 | p = 0.008 r = 0.483 | p = 0.810 r = 0.047 | p = 0.011 r = 0.467 | p = 0.619 r = 0.214 | p = 0.058 1 r = 0.829 | p = 0.810 r = −0.047 | p = 0.195 r = 0.248 | p = 0.026 r = 0.412 | p = 2×10−4 r = 0.636 |
DNMT3B | p = 2.6×10−6 r = 0.781 | p = 3×10−4 r = 0.824 | p = 0.094 r = 0.335 | p = 0.002 r = 0.745 | p = 0.215 r = 0.536 | p = 0.000 2 r = 1.000 | p = 0.731 r = −0.071 | p = 0.175 r = 0.385 | p = 0.120 r = 0.313 | p = 0.034 r = 0.569 |
MBD2 | p = 0.001 r = 0.580 | p = 0.002 r = 0.549 | p = 0.143 r = 0.279 | p = 0.052 r = 0.365 | p = 0.462 r = 0.310 | p = 0.356 r = 0.486 | p = 0.956 r = 0.011 | p = 0.133 r = 0.286 | p = 0.449 r = 0.146 | p = 0.027 r = 0.411 |
MBD4 | p = 6×10−9 r = 0.849 | p = 8×10−10 r = 0.871 | p = 0.115 r = 0.299 | p = 0.002 r = 0.553 | p = 0.151 r = 0.571 | p = 0.058 1 r = 0.829 | p = 0.932 r = 0.017 | p = 0.187 r = −0.252 | p = 0.164 r = 0.266 | p = 0.120 r = 0.295 |
Statistically (or almost statistically) significant correlations are indicated by the p-value and the Spearman's rank correlation coefficient (r) highlighted in bold.
Correlation values were established for just the 6 patients from whom paired data were available.
Correlation values were established for just the 5 patients from whom paired data were available.