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. Author manuscript; available in PMC: 2013 Oct 1.
Published in final edited form as: Chem Biol Drug Des. 2012 Jul 23;80(4):631–637. doi: 10.1111/j.1747-0285.2012.01428.x

Table 1.

Drugs ranked by mean Tanimoto combo score with docked scores.

Record # Drug name Tanimoto Combo Score (± SD) Tanimoto Shape Score Tanimoto Color Score Docked score (kcal/mol) Calculated buried MDM2 surface (Å2)
nutlin 2 −6.8 (9 docks) 317
nutlin 3a-CM −7.7 (9 docks) 329
nutlin 3a-OG −7.1 (9 docks) 282
ZINC03830283 S-bepridil/Vascor 0.802±0.091 0.538 0.264 −6.55 276
ZINC03831395 Protirelin/Thyrel TRH 0.784±0.076 0.523 0.261 −5.73 249
ZINC11677473 Azaribine/Triazure 0.756±0.144 0.49 0.265 −5.49 257
ZINC01847743 caramiphen, Ordrine AT 0.749±0.015 0.43 0.319 −5.82 218
ZINC03812918 R-bepridil 0.748±0.057 0.49 0.258 −6.66 252
ZINC00001446 Prenazone, Feprazone 0.748±0.049 0.488 0.259 −6.62 244
ZINC00537935 Lorcainide 0.745±0.040 0.442 0.303 −6.91 269
ZINC00607836 Doxapramhydrochloride/Dopram 0.742±0.061 0.499 0.243 −6.24 273
ZINC01530778 Phenylbutazone 0.742±0.053 0.489 0.253 −6.34 220
ZINC03831172 Nafronyl-d4 0.729±0.057 0.467 0.263 −5.92 292
ZINC04026871 nandrolone phenylpropionate 0.728±0.056 0.462 0.266 −7.61 291
ZINC00601229 Azelastine 0.726±0.064 0.45 0.276 −7.28 229
ZINC00000452 Mephenoxalone 0.724±0.041 0.362 0.363 −4.72 171
ZINC04534031 Azlocillin 0.724±0.065 0.504 0.221 −6.55 281
ZINC00001732 Midazolam hydrochloride 0.722±0.065 0.462 0.26 −6.69 201