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. 2011 Aug 19;34(5):1195–1209. doi: 10.1007/s11357-011-9302-9

Table 2.

Oligonucleotides used to measure BER enzyme activity

  Name Sequence
AP endonuclease THF control 5′ ATATACCGCGGCCGGCCGATCAAGCTTATT 3′
THF 5′ ATATACCGCGG(THF)CGGCCGATCATCAAGCTTATT 3′
THF Comp 5′ AATAAGCTTGATGATCGGCCGGCCGCGGTATAT 3′
Polymerase β Polβ control 5′ CTGCAGCTGATGCGCCGTACGGATCCCCGGGTTAC 3′
GAP 15mer—5′ CTGCAGCTGATGCGC-OH 3′
18mer—5′ P-TACGGATCCCCGGGTTAC 3′
GAP Comp 5′ GTAACCCGGGGATCCGTACGGCGCATCAGCTGCAG 3′

THF tetrahydrofuran, Comp complementary sequence, GAP double-stranded oligonucleotide containing single nucleotide gap