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. 2012 Sep 24;7(9):e43578. doi: 10.1371/journal.pone.0043578

Table 1. Summary of FRET biosensors developed.

FRET biosensor Detects Family Inducer of gene expression (fold change)1 Core SBP Best structural model Parent vector Plasmid ΔFRET on saturation (%) Ligand bound Kd (M)
SMb20036-CY quinic acid TRAP D-quinic acid (8.7) E27- Class II/ pCYS pLMB229 −4.7±0.4 D-quinic acid 5.9±1.1×10−9
Q338 cluster E shikimic acid 1.0±2.7×10−4
SMb20712-CY myo-inositol ABC;CUT2 myo-inositol (6.4) E22- Class I/ pCYS pLMB319 4.7±0.7 myo-inositol 4.7±2.5×10−7
N309 cluster B
SMc02324-CY/ L-rhamnose ABC;CUT2 L-rhamnose (>6.2) E25- Class I/ pCYS pLMB291 −5.5±0.4 L-rhamnose 7.3±1.3×10−9
SMc02324-RO erythritol (>6.2) F329 cluster B L-fucose 1.1±0.2×10−5
pROS pLMB523 6.4±0.5 L-rhamnose 6.9±1.4×10−9
L-fucose 1.9±0.5×10−5
SMc02774-CY L-fucose ABC;CUT2 D-fucose (6.7) Q33- Class I/ pCYS pLMB292 −4.2±0.4 L-fucose 3.6±1.7×10−9
pyruvate (4.9) N329 cluster B L-rhamnose 1.6±0.6×10−6
L-fucose (4.2)
SMc04259-CY β-diglucosides ABC;CUT1 gentiobiose (19) T24- Class I/ pCYS pLMB345 2.1±0.2 cellobiose 3.3±0.9×10−8
D441 cluster B gentiobiose 5.3±2.1×10−8
RL2376-CY D-galactose ABC;CUT2 D-arabinose (3.6) A31- Class I/ pCYS pLMB394 5.2±0.4 D-galactose 5.3±1.7×10−6
D-galactose (2.6) Y327 cluster B
rcc03024-CY C4- TRAP NA E27- Class II/ pCYS pLMB414 −2.7±0.2 succinate 3.6±0.7×10−8
dicarboxylates E333 cluster E fumarate 5.8±1.2×10−8
L-malate 7.0±1.4×10−8
oxaloacetate 1.6±0.6×10−5
1

Inducer of gene expression is taken from [9]. NA: not applicable.