Table A1 . Numbers of assembled Q30 and Q40 base pairs and allelic depths for the MW and RAL samples on the X and autosomes.
| Q ≥ 30 | Q ≥ 40 | |||
|---|---|---|---|---|
| MW | RAL | MW | RAL | |
| All chromosomes | ||||
| bp | 109,883,720 | 110,963,890 | 108,943,964 | 110,681,459 |
| Maximum allelic depth | 7 | 36 | 7 | 36 |
| Mean allelic depth | 5.35 | 31.76 | 4.82 | 28.69 |
| Coding maximum allelic depth | 7 | 36 | 7 | 36 |
| Coding mean allelic depth | 5.40 | 31.99 | 4.73 | 27.70 |
| Autosomes | ||||
|---|---|---|---|---|
| bp | 89,468,274 | 90,351,443 | 88,727,797 | 90,144,978 |
| Maximum allelic depth | 6 | 36 | 6 | 36 |
| Mean allelic depth | 5.10 | 31.73 | 4.61 | 28.99 |
| Coding maximum allelic depth | 6 | 36 | 6 | 36 |
| Coding mean allelic depth | 5.19 | 32.05 | 4.55 | 28.15 |
| X chromosome | ||||
|---|---|---|---|---|
| bp | 20,415,446 | 20,612,447 | 20,216,167 | 20,536,481 |
| Maximum allelic depth | 7 | 35 | 7 | 35 |
| Mean allelic depth | 6.45 | 31.91 | 5.75 | 27.37 |
| Coding maximum allelic depth | 7 | 35 | 7 | 35 |
| Coding mean allelic depth | 6.66 | 31.61 | 5.81 | 24.95 |