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. 2012 Oct;78(20):7347–7357. doi: 10.1128/AEM.01732-12

Table 2.

S. enterica serovar Paratyphi B (dT+) isolates used for phenotypic and molecular analysis in this study

Strain no. Yr of isolation Origin Resistancea PFGE cluster PFGE profile no. MLST sop-ST Microarray (PAT PT)b O antigen
02-04534 2002 Fertilizer Susceptible B 44 149 12-34-25 9 4,5,12
02-00729 2002 Reptile, Mississippi turtle Susceptible B 32 43 11-25-25 5 4,5,12
02-04564 2002 Reptile, snake Susceptible A 15 88 NT NT 4,5,12
02-04565 2002 Reptile, snake Susceptible A 28 88 NT NT 4,5,12
02-04626 2002 Reptile, corn snake TET A 19 88 NT NT 4,5,12
04-01793 2004 Reptile, snake TET A 14 88 39-28-24 2 4,5,12
05-01473 2005 Reptile, snake STR TET TMP A 3 88 39-28-24 2 4,5,12
05-05074 2005 Reptile, snake Susceptible A 28 88 NT NT 4,5,12
07-01916-1 2007 Fish, pintado Susceptible B 58 88 41-28-24 2 4,5,12
07-03272 2007 Reptile, snake Susceptible A 1 88 NT NT 4,5,12
07-04003 2007 Reptile, unkown Susceptible A 20 88 NT NT 4,5,12
08-01440 2008 Reptile, turtle Susceptible B 54 88 NT NT 4,5,12
08-04475 2008 Reptile, snake NAL CIP A 16 88 NT NT 4,5,12
09-01458 2009 Reptile, snake Susceptible A 12 88 NT NT 4,5,12
09-02038 2009 Reptile, snake Susceptible A 2 88 39-28-24 4 4,5,12
09-02329 2009 Reptile, snake TET A 13 88 NT NT 4,5,12
09-02447 2009 Reptile, snake Susceptible A 10 88 NT NT 4,5,12
09-02452 2009 Reptile, turtle Susceptible A 10 88 39-28-24 2 4,5,12
09-02772 2009 Reptile, snake Susceptible A 26 88 NT NT 4,5,12
09-03579 2009 Reptile, snake Susceptible A 11 88 NT NT 4,5,12
09-03667 2009 Chicken, meat Susceptible B 47 149 12-34-25 9 4,5,12
09-04735 2009 Reptile, snake Susceptible A 17 88 NT NT 4,5,12
10-00628 2010 Reptile, unkown Susceptible A 18 88 NT NT 4,5,12
10-02147 2010 Reptile,snake Susceptible A 22 88 39-28-24 2 4,5,12
10-03633 2010 Reptile,snake Susceptible A 27 88 39-28-24 2 4,5,12
10-04378 2010 Reptile, snake Susceptible A 8 88 39-28-24 3 4,5,12
10-04870 2010 Reptile, snake Susceptible A 25 88 NT NT 4,5,12
02-04177 2002 Chicken, feces CIP NAL STR TMP C 60 28 38-27-0 1 4,12
03-01517 2003 Fish STR TMP C 60 28 NT NT 4,12
03-02942 2003 Turkey AMP STR SMX TET TMP C 60 28 NT NT 4,12
04-03840 2004 Cattle, organ CIP KAN NAL STR SMX TET TMP C 60 28 NT NT 4,12
05-01581 2005 Compost AMP CIP NAL STR SMX TMP C 60 28 NT NT 4,12
06-02092 2006 Ice cream CIP NAL STR TMP C 60 28 NT NT 4,12
06-05076 2006 Chicken, meat AMP CHL STR SMX TET TMP C 60 28 NT NT 4,12
08-00451 2008 Chicken, meat AMP CIP NAL STR TMP C 60 28 NT NT 4,12
08-01554 2008 Chicken, meat SMX STR TET TMP C 62 28 NT NT 4,12
08-02848 2008 Cattle, organ CIP NAL TMP C 65 28 38-27-0 1 4,12
08-04157 2008 Chicken, meat AMP CIP GEN NAL SMX TMP C 68 28 NT NT 4,12
08-04806 2008 Chicken, meat CIP NAL SMX TMP C 60 28 NT NT 4,12
09-02946 2009 Chicken, meat AMP CHL CIP GEN KAN NAL SMX STR TET TMP C 73 28 38-27-0 1 4,12
09-03610 2009 Chicken, meat CHL CIP NAL SMX STR TET TMP C 69 28 NT NT 4,12
09-04217 2009 Chicken, meat AMP FOT TAZ TMP C 60 28 38-27-0 1 4,12
10-00908 2010 Turkey CIP KAN NAL SMX TET TMP C 60 28 NT NT 4,12
10-01119 2010 Chicken, meat AMP CHL CIP NAL SMX STR TET TMP C 66 28 NT NT 4,12
10-01673 2010 Chicken, meat AMP CIP NAL SMX TET TMP C 60 28 NT NT 4,12
10-01782 2010 Chicken, meat CIP NAL TMP C 70 28 38-27-0 1 4,12
10-03460 2010 Cattle, organ AMP CHL CIP NAL SMX TET TMP C 60 28 NT NT 4,12
10-04808 2010 Turkey AMP CHL CIP GEN KAN NAL SMX STR TET TMP C 60 28 38-27-0 1 4,12
10-05176 2010 Chicken CIP NAL STR TMP C 71 28 NT NT 4,12
11-01472 2002 Human AMP CHL FFN SMX STR TET B 34 43 NT NT 4,5,12
11-01474 2003 Human STR TET A 5 88 NT NT 4,5,12
11-01475 2003 Human SMX STR B 33 43 NT NT 4,5,12
11-01476 2004 Human Susceptible B 45 149 NT NT 4,5,12
11-01478 2004 Human Susceptible B 52 43 NT NT 4,5,12
11-01479 2005 Human STR B 46 149 NT NT 4,5,12
11-01480 2005 Human COL B 40 110 NT NT 4,5,12
11-01481 2005 Human Susceptible B 50 43 11-25-25 5 4,5,12
11-01482 2006 Human Susceptible B 42 149 NT NT 4,5,12
11-01483 2007 Human Susceptible B 58 88 NT NT 4,5,12
11-01484 2007 Human Susceptible A 6 88 39-28-24 3 4,5,12
11-01485 2009 Human Susceptible A 23 88 NT NT 4,5,12
11-01486 2009 Human Susceptible B 55 88 41-28-24 2 4,5,12
11-01487 2009 Human Susceptible B 59 88 NT NT 4,5,12
11-01488 2009 Human Susceptible B 55 88 NT NT 4,5,12
11-01489 2009 Human Susceptible A 24 88 NT NT 4,5,12
11-01490 2009 Human Susceptible A 7 88 NT NT 4,5,12
11-01491 2009 Human Susceptible A 7 88 NT NT 4,5,12
11-01492 2009 Human AMP CHL FFN SMX STR TET B 34 43 11-25-25 6 4,5,12
11-01493 2009 Human Susceptible B 42 149 NT NT 4,5,12
11-01494 2009 Human Susceptible B 42 149 12-34-25 10 4,5,12
11-01495 2009 Human Susceptible B 49 149 NT NT 4,5,12
11-01496 2009 Human Susceptible B 31 896 12-24-25 8 4,5,12
11-01497 2009 Human Susceptible B 42 149 NT NT 4,5,12
11-01498 2009 Human Susceptible B 42 149 NT NT 4,5,12
11-01499 2009 Human Susceptible B 58 88 NT NT 4,5,12
11-01500 2009 Human Susceptible B 38 43 NT NT 4,5,12
11-01501 2009 Human AMP CHL FFN SMX STR TET B 34 43 NT NT 4,5,12
11-01502 2009 Human Susceptible B 36 307 11-25-25 11 4,5,12
11-01503 2010 Human Susceptible B 51 43 NT NT 4,5,12
11-01504 2010 Human Susceptible B 29 307 11-25-25 5 4,5,12
11-01505 2010 Human Susceptible B 41 43 NT NT 4,5,12
11-01506 2010 Human Susceptible B 35 43 NT NT 4,5,12
11-01507 2010 Human AMP SMX B 34 43 11-25-25 6 4,5,12
11-01508 2010 Human Susceptible B 37 43 NT NT 4,5,12
11-01509 2010 Human Susceptible B 56 88 NT NT 4,5,12
11-01510 2010 Human STR B 43 149 NT NT 4,5,12
11-01511 2010 Human Susceptible A 9 88 NT NT 4,5,12
11-01512 2010 Human Susceptible A 4 88 39-28-24 2 4,5,12
11-01513 2010 Human Susceptible A 4 88 NT NT 4,5,12
11-01515 2002 Human AMP CIP NAL SMX STR TET TMP C 60 28 NT NT 4,12
11-01516 2002 Human Susceptible B 30 110 12-24-25 8 4,12 (7-bp deletion)
11-01517 2003 Human CIP NAL SMX STR TMP C 63 28 NT NT 4,12
11-01518 2003 Human AMP CIP NAL SMX STR TMP C 60 28 NT NT 4,12
11-01519 2003 Human STR TMP C 60 28 NT NT 4,12
11-01520 2003 Human AMP CIP NAL SMX STR TMP C 60 28 NT NT 4,12
11-01521 2004 Human AMP FOT STR TAZ TMP C 60 28 NT NT 4,12
11-01522 2005 Human Susceptible B 48 149 46-34-25 9 4,12 (7-bp deletion)
11-01523 2005 Human Susceptible A 21 88 39-28-24 2 4,12 (7-bp deletion)
11-01524 2007 Human CHL CIP NAL SMX STR TET TMP C 67 28 NT NT 4,12
11-01525 2009 Human AMP CHL CIP COL GEN KAN NAL SMX STR TET TMP C 72 28 NT NT 4,12
11-01526 2009 Human AMP CIP FOT NAL SMX STR TAZ TET TMP C 64 28 38-27-0 1 4,12
11-01527 2009 Human Susceptible B 57 88 41-28-24 2 4,12 (7-bp deletion)
11-01528 2009 Human Susceptible B 57 88 NT NT 4,12 (7-bp deletion)
11-01529 2009 Human STR B 58 88 41-28-24 2 4,12 (7-bp deletion)
11-01530 2009 Human CIP NAL STR TMP C 61 28 NT NT 4,12
11-01532 2006 Food, spice Susceptible B 53 43 11-25-25 5 4,5,12
11-01533 2008 Sludge AMP CIP SMX B 39 43 11-25-25 7 4,5,12
11-01534 2005 Compost STR TMP C 60 28 NT NT 4,12
a

See Materials and Methods for abbreviations.

b

NT, not tested.