Table 3.
Comparison of α-diversity measurements of yeast and bacterial communitiesa
| Library | Observed richness |
Chao1 richness |
Shannon diversity |
|||
|---|---|---|---|---|---|---|
| Yeast | Bacteria | Yeast | Bacteria | Yeast | Bacteria | |
| ELD | 5 | 7 | 5.5 | 7.5 | 0.77 | 1.32 |
| FNS | 8 | 30 | 13 | 57.2 | 0.79 | 3.04 |
| HCF | 4 | 4 | 4 | 4 | 0.34 | 0.54 |
| HPM | 8 | 17 | 14 | 50 | 0.88 | 1.34 |
| HPP | 5 | 3 | 5 | 3 | 1.03 | 0.32 |
| ICF | 7 | 9 | 12 | 9.75 | 0.48 | 1.22 |
| IMH | 4 | 7 | 4.5 | 8.5 | 0.22 | 1.07 |
| MAG | 5 | 6 | 5 | 12 | 1.08 | 0.44 |
| MOV | 9 | 9 | 12 | 12.33 | 1.20 | 0.76 |
| PON | 5 | 12 | 11 | 22.5 | 0.10 | 1.48 |
| SCA | 7 | 26 | 9 | 30 | 0.52 | 2.9 |
| TBB | 7 | 16 | 7 | 26 | 1.17 | 1.86 |
| Avg | 6.17 | 12.17 | 8.50 | 20.23 | 0.72 | 1.36 |
| SD | 1.70 | 8.58 | 3.74 | 17.80 | 0.38 | 0.88 |
a
All calculations were performed using mothur (67). Only the 12 populations for which both yeast and bacterial data are available are shown here. Library identifiers are given in Table 1. Further yeast diversity information and the data for samples MEC, NNS, and SPP are available in Data Set S6 in the supplemental material.