Table 2.
Primers used in this study
| Primer name | Sequence (5′–3′) |
|---|---|
| JLW10F | GTACACACGTGAGATAACCTCCGA |
| JLW11R | TATCCCTCCGAGTGCCACCACTAAAT |
| JLW12F | TTGGATTTAGTGGTGGCACTCGGA |
| RpoD 467 fwd | ACCTGATTCAACGGGAGACGACA |
| RpoD 548 rev | ACGCTGTATGGTGGATTCGTCAGT |
| RteR promoter SDM bottom | AACAATTCATTACTCTGAACAAGTGGGTTTGTTAATACTATTTCTTCCGTCCTGAAAATT |
| RteR promoter SDM top | AATTTTCAGGACGGAAGAAATAGTATTAACAAACCCACTTGTTCAGAGTAATGAATTGTT |
| Tra D-E 5480 fwd | CACACCCAAGTCCGTGGAAACAAA |
| Tra D-E 5561 rev | TTGTCCTTTGTCGGGCGGTTGATA |
| TraA 3250 fwd | TGGAGGACGGGCATTACAAAGTGA |
| TraA 3486 rev | TGTCTGCGATGATGGGTGTGAAGA |
| TraB 4188 fwd | TTCTTGACAACGTGCTGACC |
| TraC 4423 rev | CGGGAACATCACAGGTCTTT |
| TraC 4468 fwd | TCGGAAATCAAAACACGACA |
| TraC 4641 rev | GGCGTTTTCAATCTGTTCCA |
| TraD 4812 fwd | ACCTTGCATAGTGAAGCCTCGGAT |
| TraD 4954 rev | TCTTCTTCCGACAGCTCAATGCCT |
| TraE 5629 fwd | AATCCTCTCTGCGGCACTCATCAT |
| TraE 5811 rev | AATTTCCCGTACACTTTCACGCCC |
| TraG 6218 fwd | CCCGTCTGTTCAAACGACAACGAA |
| TraG 6495 rev | AGCGTTCCTTGATGAACCAGTCCT |
| TraI 9433 fwd | TCAGTGAACAACCTTGTCCGGGAT |
| TraI 9661 rev | TCATGGAGAGCGTGGTGATGTTCA |
| TraK 11024 fwd | AGATCTATGTGCTGGACAACGGCA |
| TraK 11441 rev | TTTGGGTTATCGTCCGACCGTGAT |
| TraN 13612 fwd | TCAATGTGAAAATACGCCGCCGAAC |
| TraN 13739 rev | TTCGCTGCCCAGCTCTTTCAGATA |
| T7JLW22R | GAAATTAATACGACTCACTATAGGGATAATTAACGGGATAATCGGTTGGA |