Table 1.
Strain, plasmid, or primer | Description or sequencea (5′→3′) | Source or reference |
---|---|---|
C. acetobutylicum strains | ||
ATCC 824 | Wild type | ATCC |
xfp::intron | xfp-inactivated mutant, Emr | This study |
824-pIMP1 | Strain carrying pIMP1 | |
824-pIMP1XFP | xfp-overexpressed strain, Emr | This study |
Plasmids | ||
pWJ1 | Group II intron | 44 |
pWJ1-xfp | pWJ1 derivative for inserting intron into xfp | This study |
pIMP1 | Ampr Emr | 29 |
pIMP1-xfp | pIMP1 derivative carrying CAC1343 gene | This study |
pET28a | Novagen | |
pET28a-xfp | pET28a derivative carrying CAC1343 gene | This study |
Primers | ||
xfp-IBS | AAAACTCGAGATAATTATCCTTACACTACAGGTTCGTGCGCCCAGATAGGGTG | |
xfp-EBS1d | CAGATTGTACAAATGTGGTGATAACAGATAAGTCAGGTTCCATAACTTACCTTTCTTTGT | |
xfp-EBS2 | TGAACGCAAGTTTCTAATTTCGGTTTAGTGTCGATAGAGGAAAGTGTCT | |
xfp-UNI | CGAAATTAGAAACTTGCGTTCAGTAAAC | |
pIMP1-xfp_F | CGGGATCCATGCAAAGTATAATAGGAAAAC | |
pIMP1-xfp_R | TCCCCCCGGGTTATACATGCCACTGCCAATTAG | |
pET28a-xfp_F | AAGCTTATGCAAAGTATAATAGGAAAACATAAGG | |
pET28a-xfp_R | GGATCCTTATACATGCCACTGCCAATTAGTT |
The introduced restriction sites are underlined.