Skip to main content
. 2012 Sep 25;7(9):e46077. doi: 10.1371/journal.pone.0046077

Table 3. Genetic polymorphism data for mitochondrial DNA sequences from the Pristimantis populations in this study.

Loci Species Population N h S θW π DT DT 95% I.C. Prob. DT≠0 Simul. Coal.
16S P. brevifrons Paraguas 7 2 1 0.00076 0.00053 −1.0062 −1.0062 to 1.341 0.490
Peñas Blancas 12 4 3 0.00186 0.00094 −1.6292 −1.629 to 1.972 0.543
P. jubatus Observatorio-Santa Ana-Charguayaco 30 4 19 0.01047 0.0029 −2.5212*/−1.248 −1.712 to 1.816/−1.509 to 2.014 0.000
P. palmeri Paraguas 7 1 0 0 0 N.A. N.A. N.A.
Chicoral 14 4 4 0.00235 0.00152 −1.1644 −1.797 to 1.886 0.1440
Peñas Blancas 11 1 0 0 0 N.A. N.A. N.A.
COI P. brevifrons Paraguas 6 2 3 0.00201 0.00153 −1.2331 −1.233 to 1.909 0.268
Peñas Blancas 10 2 1 0.00057 0.00032 −1.1117 −1.111 to 1.463 0.412
P. jubatus Observatorio-Santa Ana-Charguayaco 31 4 48 0.02036 0.00604 −2.6023*/0.2368 −1.719 to 1.792/−1.507 to 2.027 0.000
P. palmeri Paraguas 7 3 2 0.00132 0.0017 1.1684 −1.237 to 1.649 0.522
Chicoral 15 7 10 0.00498 0.0045 −0.3644 −1.802 to 1.827 0.554
Peñas Blancas 13 5 94 0.04901 0.04527 −0.3921 −1.760 to 1.700 0.543

N  =  number of sequences, h  =  number of haplotypes, S  =  segregating sites, θW  =  population mutation rate per site, π  =  nucleotide diversity per site, DT  =  Tajima’s D statistic [73]. An asterisk (*) in the DT column indicates a significant deviation from the expected value under neutrality (DT = 0) as calculated from coalescence simulations. DT values in bold obtained for P. jubatus when the divergent sample UVC15842 was excluded. N.A.  =  Not Applicable. Indels and sites with missing data were not taken into account in pairwise comparisons.