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. 2012 Sep 25;7(9):e45830. doi: 10.1371/journal.pone.0045830

Table 1. Transcriptome summary of the adult stage of T. multiceps and detailed bioinformatics annotations.

Raw sequences and Assembly statistics
Raw reads 28,320,027
Clean reads 27,447,770, each 90 bp in length
GC content 49.04%
Contigs (≥300) (mean length; max; N50) 53,568 (974 bp; 11,875 bp; 1,268 bp)
Unigenes (≥300) (mean length; max; N50) 31,282 (920 bp; 11,875 bp; 1,206 bp)
Bioinformatics annotations of Tm unigenes
Gene annotation against animal proteins of Nr 17,618 (56.3%)
Gene annotation against Drosophila protein of Nr 5,925 (18.9%)
Gene annotation against UniProtKB/Swiss-Prot 14,350 (45.9%)
Gene annotation against UniProtKB/TrEMBL 16,286 (52.1%)
Gene annotation against COG 6,653 (21.3%), 24 categories
Gene annotation against KEGG 11,645 (37.3%), 213 pathway
All unigenes matching Nr, UniProtKB, COG, KEGG 17,768 (56.8%)
Gene annotation against InterPro 25,457 (81.38%), 4,562 domains/families
Gene annotation against Pfam 12,909 (41.27%), 3,396 domains/families
Predicted coding sequence (CDS) 20,896 (66.8%)
All annotated unigenes 26,110 (83.47%)
Unigenes matching all seven databases 5,509 (17.61%)
GO annotation for Nr protein hits 4,706 (15.04%), 2,360 GO terms, 48 sub-categories
Biological process 2,315 (1,578 GO terms), 27 sub-categories
Cellular component 3,354 (270 GO terms), 10 sub-categories
Molecular function 2,809 (512 GO terms), 11 sub-categories

Tm, T. multiceps.