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. 2012 Sep 25;7(9):e45655. doi: 10.1371/journal.pone.0045655

Table 1. Characteristics of ligands, coatings, and fluorophores.

Mw (Da) pI GRAVY1 Aliphatic index2 Net charge at pH 7
Ligand
EGF 6,045 4.69 −0.506 55.09 −2.2
HEWL 14,313 9.32 −0.472 65.12 7.7
HER2 Affibody 6,736 8.9 −0.625 84.58 2
HER1 Affibody 13,860 4.65 −0.507 79.68 −5
Coating
Poly-L-Lysine variable (150,000–300,000) 9.6 −3.9 0 poly-cation
Fibronectin 269,110 5.28 −0.513 69.06 −66
Laminin3 ∼700,000 ∼5.3 ∼−0.5 ∼70 −227
Collagen4 ∼300,000 ∼7.8 −0.261 to 0.919 ∼40 to 80 35
BSA 66,433 5.6 −0.475 76.14 −17
FCS mixture of proteins variable variable variable variable
Linear PEG 5,000 0
Star PEG 10,000 0
Nanogel mixture of Star PEG and BSA
Fluorophore
Alexa Fluor 488 643 −2
Alexa Fluor 546 1,079 −2
Atto 647N 868 1
1

GRAVY is the grand average of hydropathicity; more negative values indicate greater hydrophilicity [58].

2

Aliphatic index; the relative volume occupied by aliphatic side chains [59].

3

Laminin values taken as average of α1, β1, and γ1 chains.

4

Collagen values representative of the range of collagen types as commercially prepared dishes do not specify type. – indicates not applicable or not known.