Table 3. Synonymous nucleotide substitution per synonymous site and nonsynonymous nucleotide substitution per nonsynonymous site and the standard deviations between three Pvmsp-7 genes.
Synonymous nucleotide substitution per synonymous site (dS) | |||||||||
5′-end | Central region | 3′-end | |||||||
Pvmsp-7C | Pvmsp-7H | Pvmsp-7I | Pvmsp-7C | Pvmsp-7H | Pvmsp-7I | Pvmsp-7C | Pvmsp-7H | Pvmsp-7I | |
Pvmsp-7C | |||||||||
Pvmsp-7H | 0.241 (0.050) | 1.016 (0.199) | 0.879 (0.162) | ||||||
Pvmsp-7I | 0.468 (0.085) | 0.518 (0.092) | 0.956 (0.167) | 0.790 (0.140) | 0.788 (0.138) | 0.136 (0.031) | |||
Non-synonymous nucleotide substitution per non-synonymous site (dN) | |||||||||
5′-end | Central region | 3′-end | |||||||
Pvmsp-7C | Pvmsp-7H | Pvmsp-7I | Pvmsp-7C | Pvmsp-7H | Pvmsp-7I | Pvmsp-7C | Pvmsp-7H | Pvmsp-7I | |
Pvmsp-7C | |||||||||
Pvmsp-7H | 0.072 (0.017) | 1.430 (0.238) | 0.234 (0.035) | ||||||
Pvmsp-7I | 0.125 (0.028) | 0.152 (0.031) | 1.729 (0.244) | 1.841 (0.306) | 0.323 (0.047) | 0.122 (0.028) |
5′-end from nucleotides 1 to 384 (amino acids 1 to 128), central region from nucleotides 385 to 807 (amino acids 129 to 269) and 3′-end from nucleotides 808 to 1,248 (amino acids 270 to 416), numbered according to the alignment in Fig S13.