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. 2012 Sep 26;7(9):e46295. doi: 10.1371/journal.pone.0046295

Table 1. Association with ABCB1 gene expression of imputed loci with top-ranked BFs using 1000 Genome datasets as reference panels.

SNP Position A1 A2 Infor(Impute) MAF Log10(BF) P Value
rs28373093 87344023 C G 0.654 0.423 2.011 4.00E-05
rs35901799 87344022 C T 0.658 0.427 1.977 4.00E-05
rs1002205 87141174 C G 0.893 0.402 1.886 8.00E-05
rs1029421 87418861 C T 0.888 0.48 1.853 1.30E-04
rs6966166 87455155 T C 0.919 0.46 1.773 1.60E-04
rs7779623 87391761 G A 0.925 0.463 1.767 1.50E-04
rs34800935 87256602 C T 0.726 0.399 1.759 1.10E-04
rs12704370 87430669 A G 0.928 0.462 1.75 1.70E-04
rs7793933 87416839 T C 0.927 0.462 1.749 1.70E-04
rs6465119 87402536 G A 0.915 0.452 1.748 2.10E-04
rs12535512* 87220334 T C 0.445 1.694 1.90E-04
rs13229143 87219481 G C 0.959 0.444 1.604 3.40E-04
rs13233308 87244960 C T 0.978 0.455 1.592 3.20E-04
rs2373587 87157466 G C 0.996 0.391 1.565 3.50E-04
rs2373585 87157706 T C 0.996 0.391 1.565 3.50E-04
rs10236274 87162341 G A 0.997 0.391 1.565 3.60E-04
rs2373588* 87153160 A G 0.39 1.564 3.30E-04
rs7787569 87164756 A C 0.994 0.392 1.539 3.60E-04
rs2285647 87466971 A G 0.851 0.225 1.539 1.60E-04
rs2141849 87152790 A C 0.988 0.394 1.527 3.80E-04
rs1978095* 87251641 G A 0.233 1.516 3.40E-04
rs10235853 87445748 G T 0.698 0.467 1.511 2.10E-04
rs2188526 87220562 C T 0.982 0.455 1.494 4.70E-04
rs1858923 87221216 A G 0.98 0.456 1.486 4.90E-04
rs4148751 87143153 C T 0.985 0.392 1.451 4.10E-04
rs10248420 87164986 G A 0.988 0.415 1.432 5.20E-04
rs7787082 87157051 A G 0.979 0.415 1.425 5.20E-04
rs12720464 87231853 T C 0.977 0.226 1.417 3.60E-04
rs4148750 87143275 C T 0.986 0.393 1.412 4.80E-04
rs17149699 87141751 T C 0.98 0.393 1.407 4.60E-04
rs1922243* 87143504 T C 0.39 1.397 5.10E-04
rs4148744 87150774 A G 0.989 0.399 1.374 4.40E-04
rs1922244 87145483 A G 0.986 0.399 1.339 5.30E-04
rs1882477 87151524 G C 0.974 0.415 1.328 6.40E-04
rs2373589 87151658 T C 0.977 0.413 1.318 6.60E-04
rs7779562 87144816 C G 0.986 0.4 1.307 6.20E-04
rs2235047 87138532 C A 0.943 0.38 1.159 1.16E-03
rs2235018 87199365 C T 0.933 0.211 1.132 8.60E-04
rs117647666 87374828 A G 0.923 0.208 1.093 1.09E-03
rs1882478* 87137018 C T 0.466 1.056 1.44E-03
rs6949448 87141814 C T 0.88 0.49 1.055 1.43E-03
rs2235048 87138511 G A 0.961 0.424 1.046 1.77E-03
rs4148738* 87163049 C T 0.432 0.969 1.93E-03
rs1045642* 87138645 A G 0.411 0.929 2.63E-03
rs868755* 87189930 T C 0.452 0.715 5.55E-03
rs3789243* 87220886 A G 0.39 0.409 2.05E-02

P values were produced by 100000 random permutations. The SNPs marked with asterisks denote Tag SNPs. The SNPs representing independent strong associations are in bold. Physical positions of the SNPs are based on Human Reference Genome Sequence Build 37.