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. 2012 Sep 1;13(11):1112–1122. doi: 10.4161/cbt.21186

Table 1. Distinct altered genes in certain pathways.

Pathway Name Gene symbol Fold Change RefSeq. Gene Description
Focal adhesion
Itgb1
0.41
NM_010578
integrin β 1
 
Col2a1
2.49
NM_031163
procollagen, type II, α 1
 
Col1a2
7.39
NM_007743
procollagen, type I, α 2
 
Col6a1
6.64
NM_009933
procollagen, type VI, α 1
 
Col3a1
5.96
NM_009930
procollagen, type III, α 1
 
Col6a2
5.14
NM_146007
procollagen, type VI, α 2
 
Thbs2
6.94
NM_011581
thrombospondin 2
 
Prkcb1
0.18
NM_008855
protein kinase C, β 1
 
Fn1
2.30
NM_010233
fibronectin 1
 
Cav2
2.03
NM_016900
caveolin 2
 
Lama1
2.09
NM_008480
laminin, α 1
 
Pdgfra
4.87
NM_011058
platelet derived growth factor receptor, α polypeptide
 
Pik3ca
0.45
NM_008839
phosphatidylinositol 3-kinase, catalytic, α polypeptide
 
Cav1
2.21
NM_007616
caveolin, caveolae protein 1
 
Capn7
0.48
NM_009796
calpain 7
 
Lama4
3.48
NM_010681
laminin, α 4
 
Col5a3
5.84
NM_016919
procollagen, type V, α 3
 
Col5a1
2.39
NM_015734
procollagen, type V, α 1
 
Col5a2
3.63
NM_007737
procollagen, type V, α 2
 
Tnc
3.76
NM_011607
tenascin C
 
Col1a1
16.8
NM_007742
procollagen, type I, α 1
Cell Communication
Krt2–4
0.34
NM_008475
keratin complex 2, basic, gene 4
 
Des
3.26
NM_010043
desmin
 
Col2a1
2.49
NM_031163
procollagen, type II, α 1
 
Krt2–8
3.76
AK077597
Keratin, type II cytoskeletal 8
 
Col1a2
7.39
NM_007743
procollagen, type I, α 2
 
Col6a1
6.64
NM_009933
procollagen, type VI, α 1
 
Col3a1
5.96
NM_009930
procollagen, type III, α 1
 
Krt1–19
0.11
NM_008471
keratin complex 1, acidic, gene 19
 
Col6a2
5.14
NM_146007
procollagen, type VI, α 2
 
Thbs2
6.94
NM_011581
thrombospondin 2
 
Fn1
2.30
NM_010233
fibronectin 1
 
Lama1
2.09
NM_008480
laminin, α 1
 
Lama4
3.48
NM_010681
laminin, α 4
 
Col5a3
5.84
NM_016919
procollagen, type V, α 3
 
Col5a1
2.39
NM_015734
procollagen, type V, α 1
 
Col5a2
3.63
NM_007737
procollagen, type V, α 2
 
Tnc
3.76
NM_011607
tenascin C
 
Krt1–18
0.11
NM_010664
keratin complex 1, acidic, gene 18
 
Col1a1
16.80
NM_007742
procollagen, type I, α 1
ECM-receptor interaction
Col1a1
16.86
NM_007742
procollagen, type I, α 1
 
Tnc
3.76
NM_011607
tenascin C
 
Col5a2
3.63
NM_007737
procollagen, type V, α 2
 
Col5a1
2.39
NM_015734
procollagen, type V, α 1
 
Col5a3
5.84
NM_016919
procollagen, type V, α 3
 
Lama4
3.48
NM_010681
laminin, α 4
 
Lama1
2.09
NM_008480
laminin, α 1
 
Fn1
2.30
NM_010233
fibronectin 1
 
Sdc2
2.07
NM_008304
syndecan 2
 
Thbs2
6.94
NM_011581
thrombospondin 2
 
Col6a2
5.14
NM_146007
procollagen, type VI, α 2
 
Col3a1
5.96
NM_009930
procollagen, type III, α 1
 
Col6a1
6.64
NM_009933
procollagen, type VI, α 1
 
Col1a2
7.39
NM_007743
procollagen, type I, α 2
 
Col2a1
2.49
NM_031163
procollagen, type II, α 1
  Itgb1 0.41 NM_010578 integrin β 1 (fibronectin receptor β)