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. 2012 Aug 14;12:189. doi: 10.1186/1471-2334-12-189

Table 1.

Primer information

Primer Sequence 5’-3’ Gene Size (bp)
FluA F
AGGTGACACTATAGAATATTCTAACCGAGGTCGAAACG
M
270
FluA R
GTACGACTCACTATAGGGAACAAAGCGTCTACGCTGCAG
FLuB F
AGGTGACACTATAGAATAAAAAGRAGATTCATCACAGAGC
M
166
FLuB R
GTACGACTCACTATAGGGATTCTGCTATTTCAAATGCTTCA
sH1N1 F
AGGTGACACTATAGAATAGGTATGCTTTTGCAMTGARTAGAGG
HA
250
sH1N1 R
GTACGACTCACTATAGGGAAAGGGATATTCCTTARTCCTGTARCCAT
PIV1 F
AGGTGACACTATAGAATATCTCATTATTACCYGGACCAA
HA
284
PIV1 R
GTACGACTCACTATAGGGATCCTGTTGTCGTTGATGTCATA
PIV2 F
AGGTGACACTATAGAATATCTACACTGCATCAGCCAGC
HA
194
PIV2 R
GTACGACTCACTATAGGGACCCCTAAAAGAGATGAGCCC
PIV3 F
AGGTGACACTATAGAATATTGTCAATTATGATGGYTCAATCT
HA
230
PIV3 R
GTACGACTCACTATAGGGAGACACCCAGTTGTGTTGCAG
HRV F
AGGTGACACTATAGAATACCCCTGAATGYGGCTAACCT
5' UTR
144
HRV R
GTACGACTCACTATAGGGACGGACACCCAAAGTAGTYGGT
HMPV F1
AGGTGACACTATAGAATACATGCCCACTATAAAAGGTCAG
L
208
HMPV R1
GTACGACTCACTATAGGGACACCCCAGTCTTTCTTGAAA
HMPV F2
AGGTGACACTATAGAATAGAGCTAAYAGAGTGCTAAGTGATG
N
208
HMPV R2
GTACGACTCACTATAGGGAACTTTCTGCTTTGCTTCCTGT
Adv F
AGGTGACACTATAGAATAGCCSCARTGGKCWTACATGCACATC
Hexon
338
Adv R
GTACGACTCACTATAGGGACAGCACSCCICGRATGTCAAA
NL63 F
AGGTGACACTATAGAATATCCCAAATGTGATAGAGCTTTGC
Polym-erase
176
NL63 R
GTACGACTCACTATAGGGACTGTTAAAACTTGTGCCAACTC
OC43 F
AGGTGACACTATAGAATAATTGCACCAGGAGTCCCA
N
200
OC43 R
GTACGACTCACTATAGGGATATCGGTGCCGTACTGGTCT
229E F
AGGTGACACTATAGAATACTCGGAATCCTTCAAGTGACAGA
N
183
229E R
GTACGACTCACTATAGGGAACGAGAAGGCTTAGGAGTAC
HKU1 F
AGGTGACACTATAGAATATATAGTRAAACCTGATATGGCT
N
220
HKU1 R
GTACGACTCACTATAGGGATACCAAAACACTGTTGAACAT
RSVA F
AGGTGACACTATAGAATACATCCCCTCTATGCACAACC
F
158
RSVA R
GTACGACTCACTATAGGGACATGTTTCAGCTTGTGGGAA
RSVB F
AGGTGACACTATAGAATAAAACGAAGATTTCTGGGCTTC
F
279
RSVB R
GTACGACTCACTATAGGGATGCGACAGCTCTGTTGATTT
HBoV F
AGGTGACACTATAGAATAAAGAAAAGGGAGTCCAGAA
NP1
290
HBoV R
GTACGACTCACTATAGGGACTCTGTGTTGACTGAATACAG
Rnasep F
AGGTGACACTATAGAATAGAGGCCTGGCTTTTGAACTT
RNase P
125
Rnasep R
GTACGACTCACTATAGGGAATCAAATTGAGGGCACTGGA
Tag F
AGGTGACACTATAGAATA
 
 
Tag R GTACGACTCACTATAGGGA    

a The primers HMPV F1 and HMPV R1 were reported previously [14]; the primers Adv F and Adv R were reported previously [15]; the primer HBoV R was reported previously [16]. The Universal Tag sequences are underlined.