Table 3.
Annotations of sRNAs perfectly matching Chinese fir mRNA transcriptome
| Class | Unique | Percent | Redundant | Percent |
|---|---|---|---|---|
| Total |
35,709 |
1.27% |
991,997 |
7.49% |
| rRNA |
90,192 |
3.20% |
2,929,163 |
22.11% |
| tRNA |
18,394 |
0.65% |
1,611,677 |
12.17% |
| snRNA |
2004 |
0.07% |
6415 |
0.05% |
| snoRNA |
894 |
0.03% |
2428 |
0.02% |
| repeat |
12,017 |
0.43% |
736,626 |
5.56% |
| miRNA |
31,979 |
1.14% |
1,789,329 |
13.51% |
| Known miRNA (exact match) |
115 |
|
1,301,346 |
9.82% |
| Novel miRNA |
1 |
|
17 |
|
| Un-annotated |
2,672,411 |
94.91% |
6,907,892 |
52.15% |
| Total clean reads | 2,815,874 | 100% | 13,246,904 | 100% |