Table 5. List of genes enriched in endothelial cells in LCM samples.
Gene | Accession | Endothelial EST log2 fold change | q-value |
SMURF2 | AU157259 | 9.00 | <0.01 |
LIFR | NM_002310 | 8.00 | <0.01 |
HEXB | NM_000521 | 3.36 | <0.01 |
C1orf107 | NM_014388 | 4.46 | 0.01 |
ATF1 | CA337502 | 3.00 | 0.02 |
NRAS | NM_002524 | 4.13 | 0.04 |
TACC1 | AL133564 | 2.40 | 0.09 |
GPR137B | NM_003272 | 2.00 | 0.1 |
YIPF5 | AW001618 | 1.77 | 0.17 |
YES1 | NM_005433 | 2.55 | 0.18 |
ATP5O | NM_001697 | 1.08 | 0.26 |
TMED2 | NM_006815 | 1.13 | 0.29 |
EXOC8 | AI168350 | 1.00 | 0.29 |
MRPL15 | NM_014175 | 2.13 | 0.44 |
PCNA | NM_002592 | 0.72 | 0.53 |
ATP6V1C1 | NM_001695 | 1.13 | 0.53 |
SCYL2 | NM_017988 | 2.13 | 0.57 |
RRM2 | BE966236 | 0.72 | 0.57 |
DLG7 | NM_014750 | 1.13 | 0.57 |
KLHL12 | AK024412 | 0.91 | 0.59 |
UBE2J1 | NM_016021 | 0.72 | 0.62 |
SLMO2 | BF032213 | 0.68 | 0.62 |
MLF1IP | NM_024629 | 1.13 | 0.62 |
FAM33A | BE048371 | 0.72 | 0.62 |
CCDC117 | AW070234 | 0.81 | 0.62 |
TMTC3 | AA428286 | 0.55 | 0.72 |
EIF3J | BC002719 | 0.40 | 0.75 |
TOP2A | AU159942 | 0.33 | 0.76 |
WASL | AL523820 | 0.55 | 0.81 |
FIGNL1 | NM_022116 | 0.55 | 0.81 |
ABCD3 | BC009712 | 0.13 | 0.94 |
Genes were grouped according to the significance of them being enriched in endothelial cells compared with non-endothelial cells based on expression sequenced tags (ESTs). To account for multiple testing errors, an FDR was employed to calculate the significance of the genes being endothelial enriched (q<0.05). Bold text indicates genes that are significantly enriched in endothelial cells with a q-value of <0.05.