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. 2012 Oct 2;7(10):e46623. doi: 10.1371/journal.pone.0046623

Table 2. ORFs in the inverted repeats and their predicted features.

Designation Map position Predicted Features
HP1/HP1′ F(163..570)/C(26563..27591) Secretory pathway; transmembrane region
F-LANA/F-LANA′ F(3391..4416)/C(26563..27591) Nuclear localization; N-terminal DNA-binding domain
F-ICP0/F-ICP0′ F(6387..7202)/C(23780..24595) Similar to TAF9 RNA polymerase II; Nucleotidylylation signature
HP4/HP4′ F(6484..7146)/C(23836..24498) Hypothetical protein; ORF overlapping with F-ICP0
HP6/HP13 F(8063..8833)/C(22137..22919) Nuclear localization; ORFs extending into US; N-terminally identical proteins
HP7/HP11 F(8349..8900)/C(22118..22633) Nuclear localization; ORFs overlapping with HP6/13 and extending into US; N-terminally identical proteins
LF3-like/LF3-like′ C(12..1916)/F(29066..30970) Leucine Zipper motif; C-termianl RNA-binding domain; similar to LF3 of Cercopithecine herpesvirus 15; nuclear localization;
F-ICP4a/F-ICP4a′ C(86..2041)/F(28941..30896) Nuclear localization; remote similarity to ICP4; Nucleotidylylation signature
HP2/HP2′ C(3693..4373)/F(26609..27289) Similarity to germ line helicase; overlapping F-LANA on the opposite strand
HP3/HP3′ C(4782..5105)/F(25877..26200) Putative membrane protein; transmembrane helix: aa 33–55
HP5/HP5′ C(7007..7543)/F(23439..23975 Secretory pathway; transmembrane region: aa 10–27
HP8/HP12 C(8289..8831)/F(22127..22693) Nuclear localization; products identical within C-terminus