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. 2012 Oct 15;1:e00013. doi: 10.7554/eLife.00013

Table 1.

Species tested for colony induction

DOI: http://dx.doi.org/10.7554/eLife.00013.005

Species 16S rDNA accession number Reference Rosette colonies
Algoriphagus machipongonensis PR1 NZ_AAXU00000000 Alegado et al. (2012) +
Algoriphagus alkaliphilus AC-74 AJ717393 Tiago et al. (2006) +
Algoriphagus boritolerans T-22 AB197852 Ahmed et al. (2007) +
Algoriphagus mannitolivorans JC2050 AY264838 Yi and Chun (2004) +
Algoriphagus marincola SW-2 AY533663 Yoon et al. (2004) +
Algoriphagus ornithinivorans JC2052 AY264840 Yi and Chun (2004) +
Algoriphagus vanfongensis KMM 6241 EF392675 Van Trappen et al. (2004) +
Algoriphagus antarcticus LMG 21980 AJ577141 Nedashkovskaya et al. (2004) +
Algoriphagus aquimarinus LMG 21971 AJ575264 Nedashkovskaya et al. (2004) +
Algoriphagus chordae LMG 21970 AJ575265 Nedashkovskaya et al. (2004) +
Algoriphagus halophilus JC2051 AY264839 Yi and Chun (2004) +
Algoriphagus locisalis MSS-170 AY835922 Yoon et al. (2005a) +
Algoriphagus ratkowskyi LMG 21435 AJ608641 Bowman et al. (2003) +
Algoriphagus terrigena DS-44 DQ178979 Yoon et al. (2006) +
Algoriphagus winogradskyi LMG 21969 AJ575263 Nedashkovskaya et al. (2004) +
Algoriphagus yeomjeoni MSS-160 AY699794 Yoon et al. (2005b) +
Agrobacterium tumefaciens C58 AE007870 Wood et al. (2001) +
Aquiflexum balticum BA160 AJ744861 Brettar et al. (2004a)
Bacillus subtilis 168 AL009126 Kunst et al. (1997); Burkholder and Giles (1947); Spizizen (1958)
Bacteroides fragilis NCTC9343 CR626927 Cerdeno-Tarraga et al. (2005)
Belliella baltica BA134 AJ564643 Brettar et al. (2004b)
Caulobacter crescentus CB15 AE005673 Nierman et al. (2001)
Croceibacter atlanticus HTCC2559 NR_029064 Cho and Giovannoni (2003)
Cyclobacterium marinum LMG 13164 AJ575266 Raj and Maloy 1990) +
Cytophaga hutchinsonii ATCC 33406 M58768 Lewin (1969) +
Dyadobacter fermentans DSM 18053 NR_027533 Chelius and Triplett (2000) +
Echinicola pacifica KMM 6172 NR_043619 Nedashkovskaya et al. (2006)
Escherichia coli MG1655 U00096 Blattner et al. (1997)
Flavobacteria johnsoniae UW101 CP000685 Bernardet et al. (1996)
Flectobacillus major DSM 103 M62787 Raj and Maloy (1990) +
Listeria monocytogenes 10403S CP002002 Edman et al. (1968)
Magnetospirillum magneticum AMB-1 AP007255 Matsunaga et al. (2005)
Microscilla marina ATCC 23134 M123134 Garrity (2010)
Oceanostipes pacificus HTCC2170 CP002157 Oh et al. (2011)
Robiginitalea biformata HTCC2501 CP001712 Cho and Giovannoni (2004)
Salinibacter ruber DSM13855 CP000159 Anton et al. (2002)
Sphingomonas wittichii RW1 CP000699 Miller et al. (2010)
Vibrio fischeri ES114 CP000021 Ruby et al. (2005)
Zobellia galactonovorans Dsij NR_025053 Barbeyron et al. (2001) +
Zobellia uliginosa ATCC 14397 M62799 Matsuo et al. (2003) +

−: no rosette colonies observed; +: rosette colonies observed.