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. 2012 Sep 14;9:199. doi: 10.1186/1743-422X-9-199

Table 1.

HLA-binding capability of the B cell epitopse derived from HPV16 L1

Peptide
Sequence
Binding capability (%)*
    HLA-A2 HLA-A24
9-mer
QIFNKPYWL
66.8
40.3
10-mer
AQIFNKPYWL
74.9
51.7
Flu M1
GILGFVFTL
116.7
ND
EBV
TYGPVFMCL
ND
170.6
K-Ras KLVVVG AGGV 3.3 3.8

*HLA-A2 or HLA-A24-binding capability was estimated by increase in mean fluorescence intensity (MFI), determined by flowcytometry after staining of RMA-S/A2 or RMA-S/A24 cells with anti-HLA-A2 or anti-HLA-A24 mAb, as follows; MFI increase (%) = (MFI with a given peptide – MFI without peptide)/(MFI without peptide) X 100. As positive controls, an HLA-A2-binding peptide derived from influenza virus M1 (Flu M1) or an HLA-A24-binding peptide derived from Epstein-Barr virus LMP2 (EBV) was used. As a negative control, a peptide derived from oncogene K-ras was used. ND, not determined.