Table 2.

Concordance of HPV 16 DNA (MPG) and HPV16 markers, Eastern Massachusetts, 1999–2003,

		HPV16 DNA (MPG)
HPV Markers	Status	Negative		Positive
						Kappa
		n	%	n	%
HPV16 DNA (SFPCR)						0.18
	Negative	37	77.1	50	55.6
	Positive	11	22.9	40	44.4
HPV16 L1 (MS)						0.25
	Negative	61	88.4	66	59.5
	Positive	8	11.6	45	40.5
HPV16 L1 (cLIA)						0.28
	Negative	58	85.3	59	53.1
	Positive	10	14.7	52	46.9
HPV16 E6						0.34
	Negative	64	92.8	59	53.2
	Positive	5	7.3	52	46.9
HPV16 E7						0.26
	Negative	65	94.2	71	64.0
	Positive	4	5.8	40	36.0
HPV16 E6/E7						0.36
	Negative	63	91.3	56	50.5
	Either Positive	6	8.7	55	49.6
P16						0.27
	Negative	43	86.0	40	56.3
	Positive	7	14.0	31	43.7
HPV16 E6/E7/P16						0.34
	Negative	43	86.0	35	49.3
	Either positive	7	14.0	36	50.7