Table 3.
The efficiency andr2-value results from laboratory evaluation of the BactQuant assay using genomic DNA from ATCC strains and clinical isolates belonging to 106 unique bacterial species spanning eight bacterial phyla
| Species Name | Reaction efficiency | r2-value |
|---|---|---|
|
Streptomyces violaceoruber |
93% |
>0.999 |
|
Mycobacterium abscessus |
110% |
>0.999 |
|
Mycobacterium bovis |
106% |
>0.996 |
|
Mycobacterium chelonae |
101% |
>0.999 |
|
Mycobacterium gastri |
104% |
>0.999 |
|
Mycobacterium gordonae |
104% |
>0.999 |
|
Mycobacterium fortuitum |
93% |
>0.999 |
|
Mycobacterium kansasii |
107% |
>0.999 |
|
Mycobacterium marinum |
110% |
>0.990 |
|
Mycobacterium nonchromogenicum |
101% |
>0.999 |
|
Mycobacterium phlei |
104% |
>0.999 |
|
Mycobacterium smegmatis |
105% |
>0.999 |
|
Mycobacterium vaccae |
120% |
>0.999 |
|
Mycobacterium xenopi |
112% |
>0.999 |
|
Bacteroides ureolyticus |
92% |
>0.999 |
|
Bacteroides fragilis |
82% |
>0.993 |
|
Chlamydia trachomatis |
N/A |
N/A |
|
Chlamydophila pneumoniae |
N/A |
N/A |
|
Thermus thermophilus |
97% |
>0.999 |
|
Clostridium difficile |
88% |
>0.987 |
|
Listeria monocytogenes |
104% |
>0.999 |
|
Staphylococcus arlettae |
96% |
>0.998 |
|
Staphylococcus capitis |
95% |
>0.993 |
|
Staphylococcus cohnii |
104% |
>0.999 |
|
Staphylococcus epidermidis |
96% |
>0.999 |
|
Staphylococcus equorum |
85% |
>0.997 |
|
Staphylococcus hominis |
108% |
>0.999 |
|
Staphylococcus haemolyticus |
90–104% |
>0.999 |
|
Staphylococcus kloosii |
98% |
>0.999 |
|
Staphylococcus lugdunensis |
94% |
>0.999 |
|
Staphylococcus saprophyticus |
87–98% |
>0.999 |
|
Staphylococcus xylosus |
81–100% |
>0.999 |
|
Streptococcus agalactiae |
98% |
>0.998 |
|
Streptococcus pneumoniae |
98% |
>0.999 |
|
Streptococcus viridans |
103% |
>0.999 |
|
Enterococcus faecium |
91–111% |
>0.999 |
|
Enterococcus faecalis |
90–100% |
>0.998 |
|
Fusobacterium nucleatum |
90% |
>0.999 |
|
Burkholderia pseudomallei |
103% |
>0.999 |
|
Coxiella burnetti* |
100% |
>0.998 |
|
Francisella tularensis |
100% |
>0.999 |
|
Legionella pneumophila |
98% |
>0.999 |
|
Neisseria gonorrhoeae |
95% |
>0.997 |
|
Pseudomonas aeruginosa |
90–100% |
>0.999 |
|
Pseudomonas mendocina |
93% |
>0.999 |
|
Pseudomonas andersonii |
90% |
>0.999 |
|
Pseudomonas otitidis |
93% |
>0.999 |
|
Pseudomonas stutzeri |
86% |
>0.999 |
|
Pseudomonas monteilii |
88% |
>0.999 |
|
Pseudomonas azotofixans |
84% |
>0.999 |
|
Pseudomonas mosselii |
92% |
>0.999 |
|
Pseudomonas luteola |
91% |
>0.999 |
|
Pseudomonas putida |
90% |
>0.999 |
|
Pseudomonas fluorescens |
96% |
>0.999 |
|
Pseudomonas taetrolens |
89% |
>0.999 |
|
Pseudomonas fragi |
93% |
>0.999 |
|
Pseudomonas syringae |
95% |
>0.999 |
|
Pseudomonas pseudoalcaligenes |
93% |
>0.999 |
|
Pseudomonas lundensis |
93% |
>0.999 |
|
Pseudomonas anguiliseptica |
93% |
>0.999 |
|
Cellvibrio gilvus |
92% |
>0.999 |
|
Acinetobacter baumannii |
100–105% |
>0.999 |
|
Arsenophonus nasoniae |
87% |
>0.998 |
|
Budvicia aquatica |
88% |
>0.999 |
|
Buttiauxella gaviniae |
107% |
>0.999 |
|
Cedecea davisae |
97% |
>0.999 |
|
Citrobacter freundii |
95% |
>0.999 |
|
Cronobacter sakazakii |
96% |
>0.999 |
|
Edwardsiella tarda |
106% |
>0.999 |
|
Enterobacter cloacae |
89–111% |
>0.999 |
|
Enterobacter aerogenes |
107% |
>0.998 |
|
Escherichia vulneris |
93% |
>0.999 |
|
Escherichia coli |
91–96% |
>0.999 |
|
Ewingella americana |
97% |
>0.999 |
|
Haemophilus influenzae |
91–110% |
>0.999 |
|
Hafnia alvei |
93% |
>0.999 |
|
Klebsiella oxytoca |
93% |
>0.999 |
|
Klebsiella pneumoniae |
95–100% |
>0.999 |
|
Kluyvera ascorbata |
100% |
>0.999 |
|
Leclercia adecarboxylata |
93% |
>0.999 |
|
Leminorella richardii |
94% |
>0.999 |
|
Moellerella wisconsensis |
93% |
>0.999 |
|
Moraxella catarrhalis |
91–106% |
>0.999 |
|
Morganella morganii |
95% |
>0.999 |
|
Obesumbacterium proteus |
114% |
>0.994 |
|
Pantoea agglomerans |
93% |
>0.999 |
|
Pectobacterium atrosepticum |
90% |
>0.999 |
|
Photorhabdus asymbiotica |
96% |
>0.999 |
|
Plesiomonas shigelloides |
93% |
>0.999 |
|
Pragia fontium |
100% |
>0.998 |
|
Proteus mirabilis |
98% |
>0.999 |
|
Providencia rustigianii |
93% |
>0.999 |
|
Rahnella aquatilis |
92% |
>0.999 |
|
Raoultella ornithinolytica |
94% |
>0.999 |
|
Salmonella enterica |
101% |
>0.999 |
|
Salmonella enterica subsp. enterica serovar gallinarum |
95% |
>0.998 |
|
Serratia liquefaciens |
94% |
>0.999 |
|
Shigella dysenteriae |
98% |
>0.999 |
|
Tatumella ptyseos |
101% |
>0.999 |
|
Trabulsiella guamensis |
95% |
>0.999 |
|
Yokenella regensburgei |
96% |
>0.999 |
|
Yersinia enterocolitica |
98% |
>0.999 |
|
Campylobacter jejuni |
89% |
>0.999 |
|
Vibrio cholerae |
85% |
>0.996 |
|
Borrelia burgdorferi |
90% |
>0.999 |
| Treponema denticola | 82% | >0.999 |
*No 16 S rRNA gene sequence available in the Ribosomal Database Project.