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. 2012 Oct 4;7(10):e46887. doi: 10.1371/journal.pone.0046887

Table 4. Functional enrichment analysis of top genes associated with pancreatic cancer (P<0.01 from KLM)a.

Cluster (Enrichment scoreb) Biological process Database code No. of genes P valuec
1 (6.61) GPCR, rhodopsin-like superfamily IPR017452 26 1.61×10−11
7TM GPCR, rhodopsin-like IPR000276 26 1.66×10−11
Olfactory receptor IPR000725 18 5.11×10−9
Sensory perception of smell GO:0007608 18 1.30×10−7
G-protein coupled receptor protein signaling pathway GO:0007186 29 1.53×10−7
Sensory perception of chemical stimulus GO:0007606 18 5.60×10−7
Cell surface receptor linked signal transduction GO:0007166 36 2.58×10−6
Sensory perception GO:0007600 22 4.01×10−6
Cognition GO:0050890 23 6.91×10−6
Neurological system process GO:0050877 25 6.71×10−5
Olfactory transduction hsa04740 18 2.38×10−3
2 (1.97) Homeostatic process GO:0042592 18 1.97×10−4
Chemical homeostasis GO:0048878 14 4.03×10−4
Cellular cation homeostasis GO:0030003 9 1.45×10−3
Activation of phospholipase C activity GO:0007202 5 2.25×10−3
Positive regulation of phospholipase C activity GO:0010863 5 2.25×10−3
Positive regulation of phospholipase activity GO:0010518 5 2.80×10−3
Cation homeostasis GO:0055080 9 3.04×10−3
Regulation of phospholipase activity GO:0010517 5 3.11×10−3
Positive regulation of lipase activity GO:0060193 5 3.79×10−3
Second-messenger-mediated signaling GO:0019932 8 3.91×10−3
Cellular ion homeostasis GO:0006873 10 4.59×10−3
Cellular chemical homeostasis GO:0055082 10 5.09×10−3
Cellular homeostasis GO:0019725 11 6.33×10−3
Regulation of lipase activity GO:0060191 5 6.42×10−3
Ion homeostasis GO:0050801 10 8.10×10−3
Activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger GO:0007200 4 9.77×10−3
a

DAVID analysis was based on GO, InterPro, and KEGG database.

b

The group enrichment score is the geometric mean (in -log scale) of member gene sets’ P values in a corresponding annotation cluster.

c

The P value is based on a modified Fisher’s exact test in the DAVID system, referring to one-tail Fisher’s exact probability value used for gene-enrichment analysis.