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. 2012 Oct 5;7(10):e47094. doi: 10.1371/journal.pone.0047094

Table 3. Prevalence and risk (odds ratio (95% confidence interval)) of hypercholesterolemia and low HDL at baseline according to single nucleotide polymorphisms (SNPs) of CHI3L1 in MONICA-10.

SNP genotype Hypercholesterolemia low HDL
prevalence OR (95% CI) prevalence OR (95 CI)
rs10399931 CC* 53.2 (787/1478) 1 12.2 (181/1478) 1
CT 54.3 (507/933) 1.05 (0.88–1.24) 11.6 (108/933) 0.94 (0.72–1.21)
TT 48.2 (68/141) 0.74 (0.52–1.06) 8.5 (12/141) 0.66 (0.35–1.23)
p = 0.394 p = 0.176 p = 0.408 p = 0.374
rs12123883 TT * 53.4 (1156/2165) 1 11.7 (254/2165) 1
TC 52.2 (204/391) 1.00 (0.88–1.22) 11.5 (45/391) 0.97 (0.69–1.37)
CC 46.2 (6/13) 0.70 (0.22–2.2) 38.5 (5/13) 4.06 (1.26–13.11)
p = 0.796 p = 0.829 p = 0.012 p = 0.091
rs2486064 GG* 53.1 (431/811) 1 11.0 (89/811) 1
GA 53.7 (670–1247) 1.03 (0.86–1.22) 12.9 (161/1247) 1.21 (0.91–1.60)
AA 52.2 (256/490) 0.94 (0.74–1.18) 10.6 (52/490) 0.93 (0.64–1.34)
p = 0.853 p = 0.685 p = 0.265 p = 0.205
rs2886117 GG* 63.4 (26/41) 1 11.8 (229/1944) 1
GA 56.3 (305–542) 1.20 (0.98–1.46) 12.7 (69/542) 1.12 (0.83–1.50)
AA 52.3 (1016–1944) 1.47 (0.76–2.85) 4.9 (2/41) 0.42 (1.00–1.79)
p = 0.108 p = 0.115 p = 0.314 p = 0.296
rs4950928 CC* 53.0 (843/1592) 1 11.7 (187/1592) 1
CG 53.2 (454/854) 1.00 (0.84–1.19) 12.1 (103/854) 1.06 (0.81–1.37)
GG 54.0 (61/113) 0.91 (0.61–1.35) 8.8 (10/113) 0.74 (0.37–1.46)
p = 0.976 p = 0.895 p = 0.608 p = 0.575
rs4950930 GG* 53.4 (1239/2319) 1 11.8 (273/2319) 1
GA 50.2 (113–225) 0.86 (0.64–1.14) 11.1 (25/225) 0.89 (0.57–1.38)
AA 57.1 (4/7) 1.38 (0.30–6.35) 28.6 (2/7) 2.41 (0.44–13.12)
p = 0.640 p = 0.507 p = 0.368 p = 0.538
rs6691378 GG* 52.1 (1042–2001) 1 11.8 (236/2001) 1
GA 55.4 (287/518) 1.17 (0.95–1.43) 12.5 (65/518) 1.10 (0.82–1.49)
AA 66.7 (22/33) 1.75 (0.83–3.72) 6.1 (2/33) 0.50 (0.12–2.16)
p = 0.113 p = 0.122 p = 0.521 p = 0.471
rs871799 GG* 52.8 (1096/2076) 1 12.4 (257/2076) 1
GC 54.7 (245/448) 1.05 (0.85–1.30) 10.0 (45/448) 0.80 (0.57–1.12)
CC 43.8 (14/32) 0.66 (0.32–1.36) 6.3 (2/32) 0.44 (0.10–1.89)
p = 0.439 p = 0.465 p = 0.234 p = 0.207
rs872129 AA* 53.5 (1156/2160) 1 12.5 (271/2160) 1
AG 51.0 (197/386) 0.91 (0.73–1.14) 8.8 (34/386) 0.67 (0.45–0.97)
GG 75.0 (9/12) 2.34 (0.62–8.87) 0 (0/12) 0.00 (0.00-)
p = 0.212 p = 0.290 p = 0.050 p = 0.026
rs880633 CC* 51.1 (375/734) 1 12.1 (89/734) 1
CT 54.1 (695/1284) 1.12 (0.93–1.35) 12.4 (159/1284 1.00 (0.75–1.32)
TT 53.9 (289/536) 1.09 (0.87–1.37) 10.1 (54/536) 0.80 (0.56–1.16)
p = 0.393 p = 0.491 p = 0.364 p = 0.394
rs883125 CC* 52.6 (968/1842) 1 11.8 (217/1842) 1
CG 53.9 (363/673) 1.06 (0.88–1.27) 12.0 (81/673) 0.98 (0.74–1.29)
GG 60.7 (34/56) 1.43 (0.82–2.51) 10.7 (6/56) 0.87 (0.36–2.10)
p = 0.424 p = 0.399 p = 0.952 p = 0.942
rs946263 AA* 52.9 (871/1647) 1 11.5 (189/1647) 1
AG 53.8 (437/812) 1.03 (0.86–1.22) 12.7 (103/812) 1.15 (0.87–1.50)
GG 58.7 (54/92) 1.06 (0.68–1.64) 8.7 (8/92) 0.74 (0.35–1.58)
p = 0.53 p = 0.942 p = 0.443 p = 0.356
*

Major allele

Adjusted for age and gender