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. Author manuscript; available in PMC: 2012 Oct 8.
Published in final edited form as: J Phys Chem B. 2007 Nov 3;111(47):13419–13435. doi: 10.1021/jp074285e

Figure 7.

Figure 7

Thermodynamic cycle used for computing the total deformation energy of ligands. ΔGdeform0 was found by taking the sum over all other ΔG0’s indicated in the cycle. Solvation and Coulombic matrices were generated to compute the charge-dependent portions of the cycle. The charge independent portion consisted of van der Waals, SASA, and internal energy contributions.