Table 1.

Differential expression of autophagy genes in PSdko, PS1ko, and WT ES cells

Gene symbol	WT	SKO	DKO	ALR SKO-WT	ALR DKO-WT
Uvrag	9.77	9.73	9.55	−0.05	−0.23
Wipi1	8.51	8.56	8.00	0.05	−0.51
Sqstm1	11.36	11.46	11.13	0.10	−0.23
Vps11	8.63	8.58	8.13	−0.05	−0.50
Vps18	8.81	8.43	8.35	−0.37	−0.46
Atg9b	4.65	6.33	5.38	1.67	0.73
Ambra1	8.34	8.69	8.87	0.35	0.54
Atg12	8.18	8.09	8.26	−0.09	0.08
Atg16l1	9.61	9.08	9.15	−0.53	−0.46
Atg4a	8.83	8.80	8.27	−0.03	−0.56
Atg4b	9.59	9.61	9.39	0.01	−0.21
Atg4c	6.75	6.98	7.09	0.22	0.34
Atg4d	7.76	8.08	8.07	0.33	0.31
Atg5	8.82	8.87	8.82	0.05	−0.01
Atg9a	8.32	8.62	8.35	0.30	0.03
Becn1	10.21	10.45	9.92	0.24	−0.29
Gabarap	12.05	12.09	11.58	0.05	−0.47
Gabarapl1	10.74	10.53	10.03	−0.21	−0.70
Gabarapl2	11.35	11.22	11.24	−0.13	−0.11
Irgm1	5.02	5.62	5.59	0.60	0.57
Map1lc3a	11.60	11.08	11.22	−0.52	−0.38
Rgs19	10.05	9.84	10.39	−0.20	0.34
Ulk1	8.84	8.44	8.13	−0.40	−0.71
Average ALR	0.06	−0.13
p value	0.506	0.266