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. 2012 Jul 13;40(18):8835–8848. doi: 10.1093/nar/gks642

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© The Author(s) 2012. Published by Oxford University Press.

This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.

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Figure 7. — The cumulative frequency c(r) (r represents ‘Rank’, i.e. r = 1, … , 5) in equation (13) is plotted with respect to the six programs. MDscan (squares) was performed with pre-treatments of each dataset (i.e. the SSR reduction and the rearrangement of the target DNA fragments). DME (asterisks) and Weeder (circles) were performed with the SSR reduction. Our system (rhombuses), BioProspector (triangles) and MEME (crosses) were performed without any pre-treatments. See Supplementary Figures S1–S4, concerning the results performed under other various conditions.