Table 1. Genomic alterations containing candidate genes in 1p/19q co-deleted anaplastic oligodendrogliomas in at least two tumors (as identified by genoCN).
Chromosome region | N | Genes | |
Homozygous deletion | chr19_32455280_32670285 | 6 | |
chr19_32679064_32877033 | 5 | ZNF507 | |
chr9_44683090_44770712 | 5 | ||
chr4_69097539_69135491 | 3 | TMPRSS11B | |
chr9_44779627_45338079 | 3 | FAM27C | |
chr4_69139402_69258302 | 2 | YTHDC1 | |
chr6_67075448_67105019 | 2 | ||
chr9_21963422_22123716 | 2 | CDKN2B-AS1-CDKN2A-CDKN2B-C9orf53 | |
High-level amplification | chr21_46815526_46935542 | 4 | NCRNA00175-SLC19A1-COL18A1 |
chr11_133914145_134445626 | 3 | VPS26B-GLB1L3-NCAPD3-ACAD8-B3GAT1-LOC283177-THYN1-JAM3-GLB1L2 | |
chr21_46746267_46812570 | 3 | ||
chr8_39350791_39457081 | 3 | ADAM3A-ADAM18 | |
chr11_133844842_133909403 | 2 | LOC100128239 | |
chr12_21054_213172 | 2 | LOC100288778-IQSEC3-FAM138D | |
chr3_38411_267992 | 2 | CHL1 | |
chr8_146163558_146264218 | 2 | ZNF252-TMED10P1-C8orf77-ZNF16 |