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. 2012 Oct 10;7(10):e46601. doi: 10.1371/journal.pone.0046601

Table 4. Comparison of the genotype frequencies of missense mutations and indel polymorphisms in the open reading frame of SPRN gene between cattle and buffalo.

Frequency
Position# Amino acidchange Genotype Cattle Buffalo
188 Ala63Val C/C 0.995 1.000
C/T 0.005 0.000
199 indel AAAG wt/wt 0.941 1.000
12-bp ins/12-bp ins 0.005 0.000
12-bp del/wt 0.010 0.000
12-bp ins/wt 0.045 0.000
236 Ser79Trp C/C 1.000 0.988
C/G 0.000 0.012
259 Pro87Thr C/C 0.995 1.000
C/A 0.005 0.000
262 Ala88Pro G/G 0.995 1.000
G/C 0.005 0.000
269 Leu90Pro T/T 1.000 0.988
T/C 0.000 0.012
274 275 *Pro92Thr/Met C/C C/C 1.000 0.000
A/A C/C 0.000 0.725
A/A C/T 0.000 0.263
A/A T/T 1.000 0.012
304 Ser102Gly A/A 1.000 0.000
G/G 0.000 1.000
355 Thr119Ala A/A 1.000 0.000
A/G 0.000 1.000
G/G 0.000 1.000
365 *Thr122Ile C/C 0.985 0.162
C/T 0.015 0.413
T/T 0.000 0.425
367 Gly123Ser G/G 1.000 0.922
G/A 0.000 0.066
A/A 0.000 0.012
415 *Arg139Trp C/C 1.000 0.689
C/T 0.000 0.257
T/T 0.000 0.054
425 Arg142Gln G/G 0.965 1.000
G/A 0.035 0.000
#

Nucleotide number corresponds to the coding region of SPRN sequence.

*

Denotes significant differences in genotype frequencies between cattle and buffalo.

Letters in boldface and italics indicate fixed differences between cattle and buffalo.