Table 2. Summary statistics of L. vannamei transcriptome sequencing and assembly.
Summary | Number of total nucleotides(nt) | Number of mean length of total reads | Number of mean length of total reads(bp) |
Output statistics of sequencing | 2,465,545,140 | 27,394,946 | 90 |
Assembly | Contig | Scaffold | Unigene |
Length distribution | |||
75–99 | 702,730 | − | − |
100–499 | 159585 | 139,764 | 86,564 |
500–999 | 15098 | 16,271 | 16,284 |
1000–1499 | 3,331 | 3,993 | 4,007 |
1500–1999 | 992 | 1,311 | 1,308 |
≥2000 | 663 | 1,003 | 1,006 |
Total No. | 882,399 | 162,342 | 109,169 |
Length statistics(bp) | |||
Mean length | 127 | 306 | 396 |
N50 | 90 | 399 | 478 |
Total length(Mb) | 112 | 49.6 | 43.2 |