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. 2012 Mar 21;13(Suppl 3):S9. doi: 10.1186/1471-2105-13-S3-S9

Figure 2.

Figure 2

A comparison of the p-values of the most-perturbed sub-pathways computed by ActiveModules to those computed by our algorithm. Each point represents a pathway-cancer pair: the x-axis is the p-value of the most-perturbed sub-pathway computed by our algorithm, while the y-axis is the p-value of the most-perturbed pathway, as computed by ActiveModules. The x = y line is shown in dashed green. (a) Data for all pathway-cancer pairs. (b) Data restricted to pathway-cancer pairs where the most perturbed sub-pathway computed by our algorithm has a p-value at most 0.05.