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. Author manuscript; available in PMC: 2012 Oct 15.
Published in final edited form as: Methods. 2006 Aug;39(4):342–355. doi: 10.1016/j.ymeth.2006.06.015

Table 2.

Crystal structures of Kapβ2, Csel complexes and a Crml fragment

Structure PDB-ID Ref. Organism Resolution (Å) Protein constructs
in crystals
Residues in
model
Domains/
motifs
Contact
residues
(mol. 1)
Contact
residues
(mol. 2)
Contact
residues
(mol. 3)
Contact
type
Disruptive
interface
mutants
Kapβ2- 1QBK [11] β2: human 3.0 β2: 1–890 β2: β2: β2: Ran:
   RanGppnhp Ran: human Ran: 1–216 3–152, 158–166, HEAT repeats I114 R110 HP*
170–890 S165 R110 Polar
E275 K141 Polar
Ran: E278 K141 Polar
8–197 I315 P172 HP*
E332 N154 Polar
R336 D148 Polar
P337 Y155 HP*
W373 N143 Polar
E682 K127 Polar

Kapβ2-M9NLS 2H4M [12] β2: human 3.1 β2: 1–336- β2: β2: β2: M9NLS: β2:
GGSGGSG- 6–36, HEAT repeats R805 N268 Polar W460A/
368–890 44–77, K765 Q269 Polar W730A
57–73, E809,I773 F273 HP*
M9NLS: from M9NLS: 257–305 80–319, M9NLS: W730 P275 HP*
hnRNP Al, human 368–890 extended T766 M276 HP*
T547 N280 Polar M9NLS:
M9NLS: F584,E588, F281 HP* G274A/
257–305 V643 HP* P288A/
A505,T506, R284 Polar Y289A
E509,D543, Polar
T547 Polar
L419,I457, P288 HP*
W460 HP*
A380,A381, Y289 HP*
D384,L419, HP*
R464 Polar

Csel 1Z3H [13] Yeast 3.1 1–959 Chain A: 2–529, HEAT repeats
544–870, 892–959
Chain B: 2–156,
162–525, 545–
875, 896–959

Csel-Kap60p- IWA5 [14] Csel: yeast 2.0 Csel: 1–960 Csel: Csel: Csel: Kap60p: Ran: Ran:
   Ran 1–193, 196–248, HEAT repeats R159 E42 Polar R76A/
255–371, 376– F164 V41 HP* D77A
413, 418–880, F164 L43 HP*
886–958 E166 R17 Polar
Kap60p: yeast Kap60p: Kap60p: 12–19, Kap60p: IBB, I167 L43 HP*
1–530 31–58, armadillo D220 R44 Polar K37D/
87–513 domain D227 K45 Polar K152A
D79 R44 Polar
Ran: canine Ran: 1–176 Ran: R321 D435 Polar
7–176 E387 K431 Polar R95D/
R579 E514 Polar K99A/
K62 R76 Polar K130A/
N63 D77 Polar K134A
N609 K152 Polar
D653 K37 Polar
E656 K152 Polar
H894 T93 Polar
H894 D128 Polar
E484 KI34 Polar
Q490 K95 Polar
N492 K99 Polar
Y498 K130 Polar
E506 K130 Polar
E511 K132 Polar

Crml 1W9C [15] Human 2.3 707–1034 707–1027 HEAT repeats