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. 2012 Oct 3;103(7):1490–1499. doi: 10.1016/j.bpj.2012.06.051

Table 1.

Results from the linear fits of the ln k versus force for constant-force-feedback and constant-trap-position experiments

Molecule ΔxUnfolding (nm) ΔxFolding (nm) ΔxTotal (sum) (nm) ΔxTotal (measured) (nm) Ratio of ΔxTotal ln(kCoincident)
Constant-force feedback (partition method, 100 Hz)

DNA hairpin 11.3 ± 0.6 12.1 ± 1.1 23.5 ± 1.6 17.7 ± 0.4 1.33 1.3 ± 0.4
RNA hairpin 12.1 ± 2.5 13.9 ± 2.6 26.0 ± 3.2 19.2 ± 0.4 1.35 0.9 ± 0.4
Protein 14.8 ± 8.1 22.4 ± 6.4 37.2 ± 5.6 18.9 ± 0.4 1.97 2.0 ± 0.6

Constant-trap position (partition method, 100 Hz)

DNA hairpin 9.3 ± 1.4 10.9 ± 1.8 20.2 ± 1.5 17.7 ± 0.4 1.14 1.3 ± 0.6
RNA hairpin 8.9 ± 5.6 13.2 ± 3.6 22.1 ± 6.6 19.2 ± 0.4 1.15 0.9 ± 0.9
Protein 7.5 ± 3.1 15.9 ± 5.1 23.4 ± 6.0 18.9 ± 0.4 1.24 2.4 ± 0.7

Constant-trap position (BHMM method, 1000 Hz)

DNA hairpin 7.8 ± 0.7 10.2 ± 0.9 18.0 ± 1.3 17.7 ± 0.4 1.02 1.7 ± 0.5
RNA hairpin 7.9 ± 1.9 11.6 ± 2.1 19.5 ± 3.1 19.2 ± 0.4 1.02 1.5 ± 0.7
Protein 6.1 ± 1.1 14.4 ± 3.9 20.5 ± 3.2 18.9 ± 0.4 1.09 2.8 ± 0.7

Average values reported with a 95% CI.

Distance determined from fitting a histogram of the trap position from a constant-force-feedback experiment with two Gaussian distributions and determining the difference between the two Gaussian means with a 95% CI.

Ratio of the calculated sum of the distances to the transition state to the experimentally measured distance between the two states.