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. 2012 Oct 15;7(10):e47255. doi: 10.1371/journal.pone.0047255

Table 1. Virulence factor genes tested by Real time RT-PCR.

Gene Function Primers Reference
16S rRNA Internal standard gene F: CTGGTAGTCCACGCCGTAAAC R: CAGGCGGAGTGCTTAATGC [71]
icaA Polysaccharide intercellular adhesion/polymeric N-acetyglucosamine production F: AACAGAGGTAAAGCCAACGCACTC R: CGATAGTATCTGCATCCAAGCAC [35]
dltD Esterification of teichoic acids with D-alanine F: GTGCTGCTGGTGCAGATGTTCAAT R: CTGCTTGACGACGTTCTTTATCG [31], [36]
atlA Autolysin F: TGTCGAAGTATTTGCCGACTTCGC R: TGGAATCCTGCACATCCAGGAAC [32], [37]
Psmα operon Phenol soluble modulins α F: ACCCATGTGAAAGACCTCCTTTGT R: ATGGGTATCATCGCTGGCATC [52], [72]
SPA Surface and secreted protein for bacterial aggregation F: GCGCAACACGATGAAGCTCAACAA R: ACGTTAGCACTTTGGCTTGGATCA [38]
lrgA Cell death and lysis F: CTGGTGCTGTTAAGTTAGGCGAAG R: GGCTGGTACGAAGAGTAAGCCAAT [53]
sdrD SD-repeat-containing protein F : AGTACACAGTGGGAACAGCATC R : TCTGCAGCCTTTGCTTCTTGGTTC [41], [42]
sspB Cysteine protease F: CCAGCAAATTGTTGTTGTGCTAG R: AAGCCAAAGCCGATTCACACTC [44], [73]
SigB Gene expression regulator F: TCAGCGGTTAGTTCATCGCTCACT R: GTCCTTTGAACGGAAGTTTGAAGCC [46]
AgrA Gene expression regulator F: AAGCATGACCCAGTTGGTAACA R:ATCCATCGCTGCAACTTTGTAGA [74]
RNAIII Gene expression regulator F: GCACTGAGTCCAAGGAAACTAACTCT R: AGCCATCCCAACTTAATAACCATGT [46]
CodY Gene expression regulator F: AAAGAAGCGCGCGATAAAGCTG R: TGCGATTAATAGGCCTTCCGTACC [55], [56]
ebpS Surface protein F: TTTCCGGTGAACCTGAACCGTAGT R: ACAGCAACAACAACGTCAAGGTGG [42]
cidA Cell death and lysis F: AGCGTAATTTCGGAAGCAACATCC R: TACCGCTAACTTGGGTAGAAGACG [54]
Hla Alpha-Toxin F: CTGAAGGCCAGGCTAAACCACTTT R: GAACGAAAGGTACCATTGCTGGTCA [51]