Table 5.
Predicted specificity-determining residues of the non-TIR and TIR-NBS-LRR RGAs subfamilies in pepper
|
No. |
Alignment position* |
R gene group |
Z-score |
P-value** |
|
|---|---|---|---|---|---|
| Non-TIR | TIR | ||||
| 1 |
91 |
W |
D |
4.72 |
2.41 × 10−4 |
| 2 |
98 |
W |
Y |
4.71 |
2.83 × 10−8 |
| 3 |
146 |
S |
A |
4.68 |
3.49 × 10−12 |
| 4 | 124 | V | L | 4.67 | 3.01 × 10−16 |
*Alignment position designates the amino acid position in the multiple sequence alignment presented in Additional file 3.
**P-value was used to evaluate the significance of the Z-score and assess whether the observed Z-score is sufficiently high to indicate an SDP.