Table 2.
cDNA 454 assembly statistics of L1, L2 and L1L2 L. luteus libraries
| Library statistics |
L.luteus EST-library |
||
|---|---|---|---|
| L1 | L2 | L1L2 | |
| Number of sequenced bases |
205,618,165 |
530,678,975 |
736,297,140 |
| Number of reads |
755,206 |
1,468,202 |
2,213,408 |
| Number of reads assembled |
604,869 |
1,345,892 |
1,964,517 |
| Read average length |
276 |
361 |
332 |
| Number of contigs |
26,975 |
43,674 |
71,655 |
| Contig average size |
589 |
986 |
901 |
| Number of isotigs |
21,235 |
35,191 |
55,309 |
| Isotig average size |
589 |
986 |
901 |
| Number of isogroups |
15,295 |
24,653 |
36,886 |
| Isogroup average size |
589 |
989 |
905 |
| Average number of reads by contig |
22.4 |
30.8 |
27.4 |
| %GC |
30.7 |
39.9 |
37.5 |
| Annotated sequences |
|
|
32,862 |
| Gbrowse mapped sequences | 25,400 | ||